| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1114 |
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| Symbol | |
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| ID | 5454662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1224767 |
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| End bp | 1225444 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876684 |
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| Product | phosphatidylserine decarboxylase related protein |
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| Protein accession | YP_001412392 |
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| Protein GI | 154251568 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0688] Phosphatidylserine decarboxylase |
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| TIGRFAM ID | [TIGR00164] phosphatidylserine decarboxylase precursor-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGACAGCC TTACTTCGAT TTTGACGCCT ATTCACAGGG AAGGGCACCG CTTCGCGATT
ATCTTCGCCG CGGTCACCAT CGTCCTTTTC CTGATCTGGA ATCCCCTGGG CTGGATCGGC
GTCATTCTGA CGCTCTGGTG CCTTTATTTT TTCCGCGATC CGGACCGCGT TACCCCCACG
CGCGAAGGCC TGGTGGTCAG CCCGGCCGAC GGCATCGTGA ACCTCATCAC GGAAGCCTCG
CCGCCCGAAG AACTGGGATT GGGCGATATG GTCCGCACGC GCGTTAGTAT CTTCATGAAC
GTGTTCAACT GTCATGTGAA CCGCGCGCCT GTCGCCGGGA CGGTGAAGCG GGTCGCCTAC
CGACCGGGCC TGTTTCTGAA TGCCGACCTC GATAAGGCCA GCGATGCGAA TGAACGGAAC
TCGCTTCTGA TCGAGCGGGC CGATGGCGAG CAGATCGTGG TTGTCCAGAT CGCGGGGCTT
GTCGCCCGGC GTATCGTTTG CGACGTGAGA GAGGGGCATG ACCTCGCGGC GGGTGAGCGC
TTCGGCATCA TTCGTTTTGG TAGCCGCCTC GATGTCTATC TGCCGGTCGG CGCCATACCG
CTCGTCGCCG TCGGGCAGAC GGCGATTGCC GGTGAAACCG TGCTGGCGGA TTCGATATCC
GTCTTGCCGC AAGTGTAA
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| Protein sequence | MDSLTSILTP IHREGHRFAI IFAAVTIVLF LIWNPLGWIG VILTLWCLYF FRDPDRVTPT
REGLVVSPAD GIVNLITEAS PPEELGLGDM VRTRVSIFMN VFNCHVNRAP VAGTVKRVAY
RPGLFLNADL DKASDANERN SLLIERADGE QIVVVQIAGL VARRIVCDVR EGHDLAAGER
FGIIRFGSRL DVYLPVGAIP LVAVGQTAIA GETVLADSIS VLPQV
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