| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1110 |
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| Symbol | |
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| ID | 5457014 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1219970 |
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| End bp | 1220911 |
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| Gene Length | 942 bp |
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| Protein Length | 313 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876680 |
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| Product | transporter DMT superfamily protein |
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| Protein accession | YP_001412388 |
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| Protein GI | 154251564 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2962] Predicted permeases |
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| TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAGA CACCCGCAGC CAGACCCTCT CCCCACAGCG AAGCCGCCCT CGGCGCCGCG
GCGGCGGGGC TCGGCTATCT GCTCTGGGGC GTTTCCGTCA TTTTCTACAA GCAGCTTGTC
GAGGTGCCGC CCTTCGAGGT TCTGGCGCAT CGCTCGGTGT GGAGCGTCGT CCTCGTCCTC
GCCATCATTC TTCTTCTGCG GCGCGGCCCG GAACTGATCG TGCTCCTGCG CGACCGCCGC
ACCATGCTCA CGCTTGCCGG CACCGCGTTC CTCATCGGCT CCAACTGGTT CGTCTTCATC
TATTCGATCA ACGAGCAGCG CATCCTCGAA ACGAGCCTCG GCTATTACAT CAATCCGCTG
ATGAGCGTGC TGCTCGGCGT CGCCTTTCTC GGCGAGCGCC TGTCGCGGCC GCAAATCTTC
GCCGTCGCGC TCGCCTTTAT CGGCGTTCTC TATTTCACCG TCGCGCTCGG CACGCTGCCC
TGGATTTCGC TCTACCTCGC GATCACATTC GCGGCCTATG GCTATCTGCG GAAAGTCGCG
CGGGCAGGGC CGCTCGAAGG TCTCTTCGTC GAGGTCGCCG TGCTCCTGCC GCTCGCGCTC
GCCTATCTCT GGTGGCTCTC CGGCCATGGT GGCACGAGCT TCGGCAATGG CGGCTGGCAC
ATATGGATGT TCCTTGTACT GACGGGTCCG ATGACCGCCG TGCCGCTCCT CCTCTTCACC
TTCGGCGCCC AGCGCATCCG CCTCGCCACA TTGGGCCTGA TGCAATATCT CGCGCCGACG
ACGCAGTTCT TCGTCGCCGT TTTCCTCTAT GGCGAGCCAC TTATCCCCGC CCAGGTCGCC
ACCTTCGCCC TCATCTGGAT CGGCCTGGGG ATATTCAGCG CCGATACGTG GCGTCGCGAG
CGCGAGTTGA GGCGTCTCGC CGGTCTCGAA AACCGGGGAT AA
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| Protein sequence | MQQTPAARPS PHSEAALGAA AAGLGYLLWG VSVIFYKQLV EVPPFEVLAH RSVWSVVLVL
AIILLLRRGP ELIVLLRDRR TMLTLAGTAF LIGSNWFVFI YSINEQRILE TSLGYYINPL
MSVLLGVAFL GERLSRPQIF AVALAFIGVL YFTVALGTLP WISLYLAITF AAYGYLRKVA
RAGPLEGLFV EVAVLLPLAL AYLWWLSGHG GTSFGNGGWH IWMFLVLTGP MTAVPLLLFT
FGAQRIRLAT LGLMQYLAPT TQFFVAVFLY GEPLIPAQVA TFALIWIGLG IFSADTWRRE
RELRRLAGLE NRG
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