| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1093 |
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| Symbol | |
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| ID | 5455480 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1197935 |
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| End bp | 1199395 |
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| Gene Length | 1461 bp |
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| Protein Length | 486 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876663 |
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| Product | succinic semialdehyde dehydrogenase |
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| Protein accession | YP_001412371 |
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| Protein GI | 154251547 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1012] NAD-dependent aldehyde dehydrogenases |
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| TIGRFAM ID | [TIGR01780] succinate-semialdehyde dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 69 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCTCG CTTCGCGCCT CAAGGACAAG ACATTGCTGA AGACCCGCTG CTACATCGGC
GGCAAATGGG TAGGGGAGGA TGCAAGGCAG ATAGATGTGC AGGATCCGGC GACAGGTGAT
GTCATAGCGC AGGTGCCATC CCTCGGTGCC GCCGAAACCA GGGCTGCGAT AGAGTCTGCC
AATACCGCGC AAAAGGCCTG GGCCGCCCGC CCGGCGAAAG ACCGTTCGGT AATCCTTCGC
CGCTGGTTCG ACCTGATGAT GCAGAACCAG GACGATCTTG CGGCCATCCT CACGGCGGAG
CAGGGCAAGC CGCTCGCCGA GGCGAAAGGC GAAATCGCCT ATGCCGCCGC CTTCATCGAG
TTCTATGCCG AAGAGGCCAA GCGCGTTTAC GGCTCCATCG TTCCCGCGCC TGCATCCGAT
CGCCGTATCG TCGTGCTGAA ACAACCCGTC GGCGTCTGCG CCGCCATCAC GCCATGGAAT
TTTCCGGCCG CCATGATCAC GCGGAAAGCG GCCCCCGCTC TCGCCTCTGG CTGCGCGATG
GTCGTAAAGC CAGCCACCAT GACGCCGCTC TCCGCCTTCG CCCTCGCCGA GCTTGCGGAG
CGGGCAGGGC TTCCCGCCGG TCTCCTCAGC ATCGTCACCG GCAAGGCGGG CGAGATCGGA
GGCGAGCTGA CATCAAGCGC GCTGGTTCGC AAGGTCACCT TCACCGGCTC CACCGAGATC
GGCAAGGATC TGATGCGCCA GTCGGCGTCG ACGGTGAAGA AGATTTCGCT CGAACTCGGT
GGCAACGCAC CCTTCCTCGT CTTCGACGAT GCGGATATCG ACGCCGCGGT CGAAGGTGCC
GTCGCCTCCA AATACCGCAA CACCGGCCAG ACCTGCATCT GCACAAACCG TTTCCTCGTC
CAGGCGGGCG TCTATGATGA ATTCGTTCGC AAGCTCGCCG AAAAAGTGGC GACGCTGAAA
GTCGGCTCCG GCTTCGAGGA AGGTGTCGCG CAAGGACCTC TGATCGAAAT GGCCGCCGTC
GAGAAAGTCG AGGAGCATGT CGCGGATGCC GTCGCCGGCG GTGCGAAAAT TCTCACCGGC
GGCAAGCGCC ACGCGAAGGG TGGCACCTTC TTCGAGCCGA CAGTCATTGC CGGCATGAAA
CGCGGCATGA AGGCCGCGCA GGAAGAAACC TTCGGGCCCC TCGCGCCCGT CTTCCGCTTC
GATACGGAAG AAGAAGCCAT CGAAATGGCG AACGACACGC CCTTCGGCCT TGCTTCTTAT
TTCTATACGC GTGATATCGG CCGCGTCTGG CGCGTCGCGG AGGCGCTGGA ATGCGGCCTC
GTCGGCGTCA ATGCAGGATT GATTTCCACG GAGCTCGCGC CCTTCGGCGG CTTCAAGGAA
TCGGGCGTCG GCCGCGAGGG TGGTCCATGG GGAATGGAAG AATTCCTCGA AGTGAAATAT
GTCGCAATGG CGGGGCTCTG A
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| Protein sequence | MTLASRLKDK TLLKTRCYIG GKWVGEDARQ IDVQDPATGD VIAQVPSLGA AETRAAIESA
NTAQKAWAAR PAKDRSVILR RWFDLMMQNQ DDLAAILTAE QGKPLAEAKG EIAYAAAFIE
FYAEEAKRVY GSIVPAPASD RRIVVLKQPV GVCAAITPWN FPAAMITRKA APALASGCAM
VVKPATMTPL SAFALAELAE RAGLPAGLLS IVTGKAGEIG GELTSSALVR KVTFTGSTEI
GKDLMRQSAS TVKKISLELG GNAPFLVFDD ADIDAAVEGA VASKYRNTGQ TCICTNRFLV
QAGVYDEFVR KLAEKVATLK VGSGFEEGVA QGPLIEMAAV EKVEEHVADA VAGGAKILTG
GKRHAKGGTF FEPTVIAGMK RGMKAAQEET FGPLAPVFRF DTEEEAIEMA NDTPFGLASY
FYTRDIGRVW RVAEALECGL VGVNAGLIST ELAPFGGFKE SGVGREGGPW GMEEFLEVKY
VAMAGL
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