| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1087 |
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| Symbol | |
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| ID | 5456950 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1192137 |
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| End bp | 1193165 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876656 |
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| Product | alpha/beta hydrolase fold |
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| Protein accession | YP_001412365 |
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| Protein GI | 154251541 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0532953 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 68 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAGAAG ACGCAGAAAC AACCCTGATG CCTGATCTTT CCAGGGCAGC GTCGCTGGAC
GCGAATGCCC TTTCGCGCCG CCAGCTGTTG GTGCTGGCCG CAGCGGGAGG AGCGGCTTCC
ATCATTTCTT CCGTCCCGGG CTTCGCCTCG GCCTCGCCAT TGACCCAGAA TCTCACAGGA
GATGTACCGA TGACTAGCTA CGTAACCACC AGGGATGGCG TCGATATTTT CTATAAGGAC
TGGGGGCCGA AGGATGCGCA GCCAATCATG TTTCATCATG GCTGGCCGCT CTCGTCCGAC
GACTGGGACG CACAGATGCT CTTTTTCGTC CAGAATGGCT ATCGCGTGGT TGCTCATGAT
CGGCGCGGTC ACGGGCGTTC GAGTCAGGTC TCCGAAGGCC ACGATATGGA CCACTACGCC
GCCGATGCTT TCGCCGTCGT CGAGCACCTC GATCTGAAGA ATGTCGTTCA TATCGGACAC
TCGACCGGCG GCGGCGAAGT CGCCCGTTAT GTGGCGAAGT TCGGCCAGCC GGCGGGCCGC
GTTGCGAAGG CAGTGCTGGT CAGCGCCGTT CCGCCGCTAA TGGTCAAGAC GGAGGCCAAT
CCGGGTGGGA CACCGATAGA GGTTTTCGAC GGCTTTCGTG CTGCACTGGT GGCCAACCGG
GCGCAGTTCT ACCTCGACGT CGCGTCCGGT CCCTTCTACG GCTTTAATCG CGAAGGCGTG
AAGGCATCGC AGGGTGTGAT CGGCAATTGG TGGCGGCAAG GCATGAACGG CAGCGCCAAG
GCGCACTATG ACGGCATCAA GGCCTTCTCA GAGACCGACC AGACCGAAGA TCTGAAAGCA
ATCTCGGTGC CGGTGCTCGT TACGCATGGT GACGACGATC AGATCGTTCC GTACAAGGAC
GCCAGCCTTC TCAGCGTCAA GCTGGTACAA AACGGAACGC TCAAGATTTA CCCCGGCTTT
TCGCATGGCA TGCTGACCAC GCAGGCCGAA ACTCTTAATC CCGACCTGCT GGCTTTTGTG
AAGAGCTAG
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| Protein sequence | MREDAETTLM PDLSRAASLD ANALSRRQLL VLAAAGGAAS IISSVPGFAS ASPLTQNLTG
DVPMTSYVTT RDGVDIFYKD WGPKDAQPIM FHHGWPLSSD DWDAQMLFFV QNGYRVVAHD
RRGHGRSSQV SEGHDMDHYA ADAFAVVEHL DLKNVVHIGH STGGGEVARY VAKFGQPAGR
VAKAVLVSAV PPLMVKTEAN PGGTPIEVFD GFRAALVANR AQFYLDVASG PFYGFNREGV
KASQGVIGNW WRQGMNGSAK AHYDGIKAFS ETDQTEDLKA ISVPVLVTHG DDDQIVPYKD
ASLLSVKLVQ NGTLKIYPGF SHGMLTTQAE TLNPDLLAFV KS
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