| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1058 |
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| Symbol | |
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| ID | 5456627 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1162499 |
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| End bp | 1163476 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 640876628 |
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| Product | nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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| Protein accession | YP_001412337 |
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| Protein GI | 154251513 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG2038] NaMN:DMB phosphoribosyltransferase |
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| TIGRFAM ID | [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.978811 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCCGCG CCGCCACCGG CCTGCCTTTC GACGACATCC GCAACCTGCT GGCGGGCCTG
CCGCAAGCGG ATGAGCGCGC CGGCTCCGAA GCCGCTGCCC GCACGGCCGC GCTCGCCGCG
CCTTCAGGCT CGCTCGGCCG CCTCGCCGAA ATCGCGGAAT GGATGGCCGC CTGGCAGGCC
CTCCCGAAAC CGGCCGTAAC CCGCCCCCTC ATCGCCATCT TCGCCGCCAC CCACGACCTC
GCGAAGCACG CGCCGGATGC CGCGCCCGAC GGCGCCACCC ATAAGCTCGT CGAGCTTTAT
GCGGCCGGCG GCGGCGCCGT GAACCAGATC GCCCTGCAGG CGGATGCGGG CCTCAAGGTC
TTCGACCTCG CCCTGGATAT TCCCACGCCC GACATCCGGG AGGATGCGGC CCTCTCCGAA
GCGGCCTGCG CCGCCACCAT GGCCTTCGGC ATGGAGGCGA TAGCGGGCGG TGCGGACCTC
CTCTGCGTCG GCGCGGCGGG CGCGGGCAAC CGCATGGTCG CGGCGGCGCT CGCCTGCGCG
CTCCTCGGCG GCAATCCTGA AGACTGGGCG GATGGCTGGG GCAGGGAGGC GGTCGCCGCC
GCCCTCGCGC AGCATGAGGG CCACCTGGCC GACCCGCTCG AAGCACTCCG CCGCGTCGGC
GGCCGCGAAT TCGCCGCCAT TGCCGGCGCC ATCCTCGCCG CCCGCTACCA GCGCATCCCC
GTCCTGCTCG ATGGCTTCGT CGCCTGCGCG GCGGCTTCCG TCCTCCACCG GATGGCGCCT
TCCGCGCTCG ATCACTGCAT GGCCGCCCAC ACCTCCGGCG ATCCGGCCCA CGAACGTCTC
CTCACCGCTC TCGGCAAGGC GCCGCTCCTG AACACCGGAA TAGCCCTCGA AGAAGGCGCG
GGCGCCGCGC TGGCAATAGG TCTCGTGAAA TCCGCCATTG CCACGCATCG GGGCATGGCT
ACGCGGGATA TGCTCTGA
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| Protein sequence | MTRAATGLPF DDIRNLLAGL PQADERAGSE AAARTAALAA PSGSLGRLAE IAEWMAAWQA
LPKPAVTRPL IAIFAATHDL AKHAPDAAPD GATHKLVELY AAGGGAVNQI ALQADAGLKV
FDLALDIPTP DIREDAALSE AACAATMAFG MEAIAGGADL LCVGAAGAGN RMVAAALACA
LLGGNPEDWA DGWGREAVAA ALAQHEGHLA DPLEALRRVG GREFAAIAGA ILAARYQRIP
VLLDGFVACA AASVLHRMAP SALDHCMAAH TSGDPAHERL LTALGKAPLL NTGIALEEGA
GAALAIGLVK SAIATHRGMA TRDML
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