| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1054 |
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| Symbol | |
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| ID | 5456278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1159506 |
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| End bp | 1160201 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876624 |
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| Product | hypothetical protein |
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| Protein accession | YP_001412333 |
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| Protein GI | 154251509 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3577] Predicted aspartyl protease |
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| TIGRFAM ID | [TIGR02281] clan AA aspartic protease, TIGR02281 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.404862 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCAGA ACAACTGGAC CTGGGCGGCG CTCCTTCTTC TCGGATTTGT CGCATTGCTG
GCCTTTCTGG CAAACCGCTT TCCAGGCGCG CTGGACGGCG AGGATGCGCG GATGCGGCTG
GTGCATGCCG TGCTGCTGCT GGCGCTGGTG GGCGGCAGCC TGGTGCTGGG CTGGCGCGAA
CGGGCGGGCC TGGCGCTGAA GCAGGCGCTG ATATGGATCG CCATCGGCCT CGCCCTTGTT
ATCGGCTATT CCTACAGCGA CGTCTTTCAG GAAACCGGCG GGCGCCTGCG ATCTGCGCTG
GTGCCCTCCT CTCCCGTCAT CGTGGAGCCG GGGACGGCCT ATATCTCGCG GGATCTGACC
GGACATTTTC ATGCCGACGC GCTGGTGGAG GGAACCCATG TGCGCTTTCT CGTGGACACC
GGCGCGAGCG ACGTGGCCTT GAGCGCGGCG GACGCACAGC GGATCGGCAT CGACCTTTCG
ACGCTGAATT ATACCGTGCC CTACAGGACG GCAAACGGCG TGATCCATGC CGCAAGGGTG
AAGCTCGACG AGGTGAAGGT GGGCGACATC GCGCTTCGCG ACGTGACGGC CTCGATCTCG
CGCGAGGGGC TCGATACGTC GCTGCTCGGC ATGAGCTTTC TCGGCAGACT TTCCGCAGTG
GAGGTTCGCG GCGAGCGGCT GGTGCTGCGG GAATAG
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| Protein sequence | MRQNNWTWAA LLLLGFVALL AFLANRFPGA LDGEDARMRL VHAVLLLALV GGSLVLGWRE
RAGLALKQAL IWIAIGLALV IGYSYSDVFQ ETGGRLRSAL VPSSPVIVEP GTAYISRDLT
GHFHADALVE GTHVRFLVDT GASDVALSAA DAQRIGIDLS TLNYTVPYRT ANGVIHAARV
KLDEVKVGDI ALRDVTASIS REGLDTSLLG MSFLGRLSAV EVRGERLVLR E
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