| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1043 |
|---|
| Symbol | |
|---|
| ID | 5456647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 1144595 |
|---|
| End bp | 1145974 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 640876613 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001412322 |
|---|
| Protein GI | 154251498 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 0.724422 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 66 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGACG CTTGCCCGTA CAGTCTCATT TCACCTGCAT CCGCGGGCGA ACCGGATGAC
CTTCTTGCTG GAAAGAACGT TGAAGAGGGA ACGCGCCGGA TTCAGGCGTT GTTGGCGGAT
TGGCTGCGGA TGGAGAACGT CGTCGTTCTC ACAGCAGCCG GCACTTCGGT CGGCGCAGGC
GGAAGGATCA TGTCCGGACC AGCGGACAAC AATCTCGAAT GCCTTGTACT GGATGCGGTT
GAGAAATGCG AGCTCGCCGC CGAAGCAAAA GCGGTCATAG ACTGGAAGAA GAAGAACGAT
TTTGGCGGAG GGGGATTCGA GGACTGGCTT AGCTATGTCT TCAACGTCTC GCATCTGACT
TCGGACGAAA AGTCTCCTAT CAAATCTGTT CGCTGGAAGG ATGACAGCGA CCTACCCACC
AAAGCAGCAG ATAAACTGAC AGCGCTTTTG CAGCGGGCCA TTTTTGCCGA ATGCGCCCTC
GAACTGGATC GGACGGAGTT ATCTGCATCT GCCGGTTCGA CCACGGTCTC CTCCGGTCAT
ATCCCGTTCC TTGCAAAGCT GGTGGCACGA GATGCGACAC TGGGGCGGAC GCATCTCTTT
ACGCTCAACT ACGATACTCT CTTCGAGCAG GCTATGGAGG AACTGGGAAT ACAGTATTTC
GATGGCTTCA CCGGTAGAGC CAGTGCGCGG TTTGATCCTG CCGTCTATGG GCTCGATGTC
TATTATCCCG GTGATGTCGC TGAAGGCAGG GTTCGGCGCT TCGACAAATT TCTCCAGTTC
TACAAACTGC ACGGTTCTAT TCACTGGGAA GTCGATGACA CCGGTGACGT TCGAGCGCGG
CATCGCGATC TGAGCTTTGC GCGGGCGTAT CGTGGAGCGG ATACAGCGGG AAAGGCAAAG
CTGCTGGCGC AGCCGGAGTT TTCTTCTCTT GCGCCATTGG GCATTTTGCC AACCAGCCAG
AAGTTTACGC ATACGCTCGA CATGCCATAT GCGCATCTGT TTCGTCTATT CCATGTTCGA
CTGAACCAAC CCCAGACCTT CTTTATAGTT CTGGGCTATG GGTTCGGAGA CGATCACGTG
ACGCGAATTA TCGAGACGGC TCTGATGAAC CCGTCCTTGG TGATGCTGGT TGTTGAGCCA
AATCCGGAAT CGGTCATCAT CTCCAAAATT CGTAAGTACC AGAGTCTGGG ACAGCGTGCC
TTTGTGCTAA CCGAACGGTT GGCCGGGGGA GGCAAGTGCT CGTATCAGGT GGCTACGTTT
TCCGACTTTG CCCGAAATGT GATGCCCGAT GTTAAATGGT TGGAGGACTA CAAGCGGCTG
CGGACTTTCG AAGGTCAACT GAAGAAGCAA GAGTCCGACG ATCAGAAGTC GGGGGCATGA
|
|---|
| Protein sequence | MDDACPYSLI SPASAGEPDD LLAGKNVEEG TRRIQALLAD WLRMENVVVL TAAGTSVGAG
GRIMSGPADN NLECLVLDAV EKCELAAEAK AVIDWKKKND FGGGGFEDWL SYVFNVSHLT
SDEKSPIKSV RWKDDSDLPT KAADKLTALL QRAIFAECAL ELDRTELSAS AGSTTVSSGH
IPFLAKLVAR DATLGRTHLF TLNYDTLFEQ AMEELGIQYF DGFTGRASAR FDPAVYGLDV
YYPGDVAEGR VRRFDKFLQF YKLHGSIHWE VDDTGDVRAR HRDLSFARAY RGADTAGKAK
LLAQPEFSSL APLGILPTSQ KFTHTLDMPY AHLFRLFHVR LNQPQTFFIV LGYGFGDDHV
TRIIETALMN PSLVMLVVEP NPESVIISKI RKYQSLGQRA FVLTERLAGG GKCSYQVATF
SDFARNVMPD VKWLEDYKRL RTFEGQLKKQ ESDDQKSGA
|
|---|
| |