| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1038 |
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| Symbol | |
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| ID | 5456369 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1139359 |
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| End bp | 1140543 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876608 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001412317 |
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| Protein GI | 154251493 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 67 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTACCGC TCCAAGGCAT TAGGGTCATA GATCTCACGA CGGTCGCGAT GGGCCCCCTC
GCGAGCCAAT GGTTGGGGGA TTTCGGCGCC GACGTGATCA AGATCGAGGC GCCAGACGGT
GACTCGACAC GTCAGACGGG ACCTTCGACC GAGGCTGGAA TGGCAACCAT GTTCCTCAGC
GCCAACCGCA ACAAGCGAAG CGTCGTACTC GACCTGAAGG AGCCTGAAGC CCGCGAAACA
CTCGAACGCC TGATCAATAG CGCCGACGTC TTCATGCACA ACATCCGGCC CCAGAAGTTG
GAGAGGTTGG GACTGGAACC GGAAAAACTG ATCGAGCGGA ATCCGCGACT GGTCTACGCG
GGGCTACATG GGTTTGGTGA GGCGGGGCCA TATGGCGGGC GTCCAGCCTA TGACGACATT
ATTCAGGGCC TGTCGGGCTG CGCCGACCTG ATGCGGCGGC AAACGGGCGA GCCTCAGTAT
TTTCCGACGA TCACCGCCGA CAAGACAACC GGTTTGGTTG CGGCGATGGC GATCCTTGCT
GCACTCACCG GGCGCGCTAC AAGCGGACGT GGTGCGATCG TCGAAGTGCC AATGTTTGAG
TGCATGGTCG GCTTCAACTT GCTCGAACAT CTTTACGGTC GGCAGTTTGT GCCCCCGCAT
GGCAATATGG GCTATCCGCG CGTCCTCTCA CGTCATCGCC GCCCTTATCG CACAAGCGAC
GGGTTTATTT GCATGCTGCC ATACACTGAT GCGCATTGGC ATGCTTTCTT CGTGGAAGCT
GGGGCGGCAG AGCATGCGGC TGATCCGCGT TTTGTCACGA TGTCGGCCCG AACGACCAAT
ATTGACGAAC TTTATGAACT CGCTGCCGGT TTGATCGCGC AGTACAGCAC CGGCCATTGG
CTCGCGGCGT GCGAACGGAT CGGCGTTCCC GCCGCGCCGG TGCTATCGCT CGATGACCTG
ATTGAAGATC CGCATCTCGA CGCGGTCGAC TTCTTTTCGG AGTTGCATGA CCCGGCGCTG
GGTGACCTGC TCATGCCAGG CGTACCGGTG CTGTTTGATG GTGAGCGACC GCCGGTCGGC
ATGCCTCCCC GGCTGGGACA GCACAACGAC GAGGTGCTGG GAGAGGGCGG TATAAGCAAG
ATCGATGCAG AAGAGCCCCG CGCGCGCGGG CCATCGGAAG ACTAG
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| Protein sequence | MLPLQGIRVI DLTTVAMGPL ASQWLGDFGA DVIKIEAPDG DSTRQTGPST EAGMATMFLS
ANRNKRSVVL DLKEPEARET LERLINSADV FMHNIRPQKL ERLGLEPEKL IERNPRLVYA
GLHGFGEAGP YGGRPAYDDI IQGLSGCADL MRRQTGEPQY FPTITADKTT GLVAAMAILA
ALTGRATSGR GAIVEVPMFE CMVGFNLLEH LYGRQFVPPH GNMGYPRVLS RHRRPYRTSD
GFICMLPYTD AHWHAFFVEA GAAEHAADPR FVTMSARTTN IDELYELAAG LIAQYSTGHW
LAACERIGVP AAPVLSLDDL IEDPHLDAVD FFSELHDPAL GDLLMPGVPV LFDGERPPVG
MPPRLGQHND EVLGEGGISK IDAEEPRARG PSED
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