| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1034 |
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| Symbol | |
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| ID | 5456606 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1133787 |
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| End bp | 1135274 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640876604 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412313 |
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| Protein GI | 154251489 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATGTGA CAGACGGCAG TACCTCACCA GTGCCGCTGG GCGATCTCCT CGCCCGCCAT
TCCGAAAAGG ACCCGGCGCG GCCAGCGGTG ACATACAATG AAATGACGAC GAGCTACGCC
GAGCTTGATG CGCGCGCCAA TCGCAGAGCC CGCCAGCTGG AGACGATGGG CGTATGCGAG
GGTGATGTGG TGACCCTTGC CGTACCAAAC AGTCTCGAGT TCTACGAGAT CGTGTTTGCG
GTCTGGAAGT TGGGCGCAAC GCCAAACATT GTGTCTTCGA GATTACCGGT GGCTGAGTTG
CGGGCGATCG TCGAAATCGC CGGACCACGA CTGATCATCG GCGAGGAGAG TGCGCGGGTA
GATGGCTGGA ATTTTCTCGC CACCGGCACG AAACCCGGCA CTGATCTGTC CCCGGATCCC
CTCCCGACAA AAGTAGCTTC GCGCTGGAAA ATGCATACGA GTGGAGGATC AACCGGTCGC
CCGAAGCTGA TCGTGGACAA GCAGTCCGGG TTGTATGACC CTGGAAAGGC TCGTTCCATT
CAGCTGGCCG GCGAGACGAT GCTCAACCCC GGACCGCTGT ACCACAACGC CCCGTTTGTC
GGGTCTTTTC AAAGCCTGTT TGCCGGAAAT CATGTCGTTG AAATGGGACG ATTTGACCCC
CTGCGCGCGC TTGAGCTGAT CGAGCGCCAC AAAATAAACG TCGTGAGCTT CGTGCCTACA
ATGATGAACA GGATATGGCG ACTGCCCGCG GAGCAGCGCG GATCCTTCGA TCTCTCGAGC
CTTCGGCTCG TAATCCACTT GGCCTCCATA TGCCCAGCGT GGCTCAAGCA GGCCTGGATC
GACTGGCTTG GCCCCGATCG GATATTCGAA ATTTACGGTG GAAGCGAGCT TTTTGGCGGC
ACGGCCATCA CCGGACGTGA GTGGCTCTCC CACAAGGGAT CGGTCGGCAA GGTTCGACCT
GGAGCGCAGA TGCGTATACT GGATGAACAG GGCAAAGAGT GCGCGCCCGG CGAAATTGGC
GAGATTTACT TTTTGCCGGA TACGGGCCCG AATTCGACGT ATGAATATAT AGGTGCGCAG
GCAAAGACGA TGGACGGTTG GCAGACTTAC GGCGACCTTG GTCATGTGGA TGAGGAGGGC
TACCTCTACA TCGCCGACCG AAGAACCGAT ATGATCGTGT CTGGCGGTGC CAACATCTTT
CCAGCCGAGG TCGAGGCCGC ACTCGACCAA CACCCGAACG TGTTGTCCTC AATCGTGATC
GGCCTGCCCG ACGCTGATCT GGGGCAGCGC GTACATGCTA TCGTCCAGAT GGGCGAGAAC
GCTGACGAGC GCAGTGACGC AGACGTCATG CGCGAGTTCC TGTCCGACAA GCTGGTGCGG
TACAAGATAC CGCGCACCTT CGAATTCACC AGCGAGAACC TGCGTGACGA TGCCGGCAAG
GCCCGCCGGT CGCAATTGCG GGAGGAACGA ATTGCCAGCG CATCATGA
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| Protein sequence | MNVTDGSTSP VPLGDLLARH SEKDPARPAV TYNEMTTSYA ELDARANRRA RQLETMGVCE
GDVVTLAVPN SLEFYEIVFA VWKLGATPNI VSSRLPVAEL RAIVEIAGPR LIIGEESARV
DGWNFLATGT KPGTDLSPDP LPTKVASRWK MHTSGGSTGR PKLIVDKQSG LYDPGKARSI
QLAGETMLNP GPLYHNAPFV GSFQSLFAGN HVVEMGRFDP LRALELIERH KINVVSFVPT
MMNRIWRLPA EQRGSFDLSS LRLVIHLASI CPAWLKQAWI DWLGPDRIFE IYGGSELFGG
TAITGREWLS HKGSVGKVRP GAQMRILDEQ GKECAPGEIG EIYFLPDTGP NSTYEYIGAQ
AKTMDGWQTY GDLGHVDEEG YLYIADRRTD MIVSGGANIF PAEVEAALDQ HPNVLSSIVI
GLPDADLGQR VHAIVQMGEN ADERSDADVM REFLSDKLVR YKIPRTFEFT SENLRDDAGK
ARRSQLREER IASAS
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