| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1025 |
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| Symbol | |
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| ID | 5456390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1124119 |
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| End bp | 1125615 |
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| Gene Length | 1497 bp |
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| Protein Length | 498 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876595 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412304 |
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| Protein GI | 154251480 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 59 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAAGC TTTCGATATC GTCAATCATT CAGGCGCATG CCCGGCGAAA AGGTTCCGCA
CCCGCCGTCA CCTATCCTGA CGGTGCGTTG ACCTGGAGCG AACTCGACAA ACGCTCAAAC
CAGCGAGCTC GCCTGCTCGC CTCGCTGGGT GTCAAGCAAG ACAACCTTGT CGCAGTCATG
CTGCCGAATG GCAGCGAGTT CCACGAAGCC GTGGTGGCTG TCTGGAAGGC GGGCGCGACA
CCATGCATCC TGCCGTCCAA GCTTCCCGGC CGTGAAGCTA GCGACATTCT CGCGCTTGCG
CGGCCGGCGG CGGTGATTGG CGACATATCG GCCGCTTTTA ATGGGGCTCG GATTGCTCGC
GGCGCCGCCT TGGACCAGTT CAGCGATGCC CCCGTGGAAG ACGCCGGCGC CGCACATTGG
AAAGCGGTTA CGAGCGGCGG CTCCAGCGGC CGGCCCAAGA TTATCCTCGA TAGCATGCCG
GCGTTCATCG ACCCCGCCGC TCCACCCTAT GCTGGCGTTG GACTCCCAAC CGATGGGGCG
ATGCTCAACC CCGGACCGCT CTACCACAAC ATGCCGTTCC TTTTTACCAG CTTCGGCCTG
ATGACAGGTT CGCACGTCGT CGGCATGAGC CGCTTCGATG CCGAGGAATG CCTGCGACTG
ATCGAGCGGC ACCGGATCGA GTTCATGGCG GTCGTGCCGA CGATGATGCA GCGGATATGG
GCGCTGCCGG AAAGCATCCG CACATCCTAC GATATTTCCT CGATCAAAAC CGTCTGGCAC
ATGGGGGCGC CTTGTCCGCA ATGGATCAAG CGCGCATGGA TAGATTGGCT CGGTCCCGAC
AGGATTTTCG AGGCTTATGG TGGAACCGAA GCCGGAGGCT GCGCCATTAC CGGCCGCGAA
TGGCTCGCTA AACCTGGCTC GGTCGGCAAG CCCGCTCCTG GAACCTTACG CATCCTTCGA
GAGGATGGTA CGGAAGCAGA AATTGGTGAG ATCGGTGAAG TTCACTTCCC TGCTGCCGCG
AGCGGCAAGT TCCGATACAT CGGAGCGGAA TCAAAAAAGG ATGCATCGGG CGGCTACTCG
ATCGGCGATC TCGGGCATAT CGATGAGGAC GGCTATCTTT TCCTGGCGGA TCGTAGATCC
GATCTAATTC TGCGGGGAGG CGCGAACATA TATCCAGCCG AGGTCGAGGC CGTGCTGGAC
GAGCATCCGC TCGTTTCATC CTCGGCCGTG ATTGGTTTAC CGGGCGGAGA TCTGGGTGAG
CGGGTTCATG CCATCATCCA GTTGCACGAA GGTCGACAAC TCGACCTGGC ATCTATCGTC
GCGCATGTTG GCGAGAAGCT GTCCAAATAC AAGCATCCGG CATCCTACGA ACTGAGTGTT
GCACCGCTGA GGGACGACGC CGGAAAGGTT CGTCGATCCC GTTTGAAAGA AGAGCGACTG
GTGTGGCTTG AGGAAGGGCG GGCGTTTGAG TTGGCGCCTG ACCTCGGGGA GAAATGA
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| Protein sequence | MSKLSISSII QAHARRKGSA PAVTYPDGAL TWSELDKRSN QRARLLASLG VKQDNLVAVM
LPNGSEFHEA VVAVWKAGAT PCILPSKLPG REASDILALA RPAAVIGDIS AAFNGARIAR
GAALDQFSDA PVEDAGAAHW KAVTSGGSSG RPKIILDSMP AFIDPAAPPY AGVGLPTDGA
MLNPGPLYHN MPFLFTSFGL MTGSHVVGMS RFDAEECLRL IERHRIEFMA VVPTMMQRIW
ALPESIRTSY DISSIKTVWH MGAPCPQWIK RAWIDWLGPD RIFEAYGGTE AGGCAITGRE
WLAKPGSVGK PAPGTLRILR EDGTEAEIGE IGEVHFPAAA SGKFRYIGAE SKKDASGGYS
IGDLGHIDED GYLFLADRRS DLILRGGANI YPAEVEAVLD EHPLVSSSAV IGLPGGDLGE
RVHAIIQLHE GRQLDLASIV AHVGEKLSKY KHPASYELSV APLRDDAGKV RRSRLKEERL
VWLEEGRAFE LAPDLGEK
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