| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_1009 |
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| Symbol | |
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| ID | 5457025 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1102440 |
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| End bp | 1103492 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876580 |
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| Product | nitrite reductase, copper-containing |
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| Protein accession | YP_001412289 |
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| Protein GI | 154251465 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2132] Putative multicopper oxidases |
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| TIGRFAM ID | [TIGR02376] nitrite reductase, copper-containing |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 62 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCCCT TCAGAAAAGC ACTCATCGGC ACCGCAAGCA GCATCGCGCT GCTCGCCAGC
CTCTCCATCG GCGCCGTTGC CGCCGATCCG GCAGCGGACA CCGAGGCCGG GGCGGCCCTC
ACCTCCATCG CTCTCGACCC CACGACCGTT CCGGCTCCCA TCGCCCGCGA CCATGCGGCG
ACGATCAAGC TGGAACTGCA AACCATCGAA CGCGAGGCGG AACTCGCGGA CGGCACCACC
TTCCGCTTCT GGACCTTCAA CGGCACGGTG CCCGGCCCCT TCGTGCGGGC ACGCGTGGGC
GACACAATCG ACGTCGCCTT CAGCAATGCC GAAGACAGCA CCATGTTCCA CTCCGTCGAC
TTTCACGCGG TGACGGGACC CGGCGGCGGC GCGGTGGCGA CGCAGACGGC GCCCGGCGAG
CATAGCGGCT TCAGTTTCAA GGCGCTGAAC CCCGGCATCT ATGTCTATCA CTGCGCCACG
CCGATGGTGG CCGATCACAT CCAGGCCGGC ATGTACGGGC TGATCCTGGT CGAGCCGGAA
GGCGGCCTGC CGCCTGTCGA CCGCGAACTC TATGTCATGC AGGGCGAGGT CTATACCGAG
CTTGCCTATG GCGAGAAGGG CGAAGCCTTC ACCGATTACG ACAAGCTGCT CGACGAGAAG
CCGGAATATT ACGTCTTCAA CGGCGCGGTC GGCGCGCTGG CCGGCGACAA CGCGATCAAG
GCGAAGACCG GCGAAACGGT CCGCATCTAT TTCGGCGTCG GCGGTCCGAA CAAGACCTCC
AGCTTCCACG TCATCGGCGA GATCATGGAC AAGGTCTACA CGCATGGCTC GCTGACGAGC
CCCGCCTCTC TCGATGTGCA GACGGTAACG GTCGCCCCCG GCGGCGCGAC GGTGGCCGAG
GTCACCTTCG ACGTGCCGGG CCGTTACCTC CTCGTCGATC ATGCACTCTC CCGGCTGGAA
CGCGGCCTTG TCGCCATGAT CGAAGTCGAA GGGCCCGCCG ATACCGCGAT CTTCAATACG
GGCGACGCCG AACTCAGCAT GGCTGGTCAC TGA
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| Protein sequence | MSPFRKALIG TASSIALLAS LSIGAVAADP AADTEAGAAL TSIALDPTTV PAPIARDHAA
TIKLELQTIE REAELADGTT FRFWTFNGTV PGPFVRARVG DTIDVAFSNA EDSTMFHSVD
FHAVTGPGGG AVATQTAPGE HSGFSFKALN PGIYVYHCAT PMVADHIQAG MYGLILVEPE
GGLPPVDREL YVMQGEVYTE LAYGEKGEAF TDYDKLLDEK PEYYVFNGAV GALAGDNAIK
AKTGETVRIY FGVGGPNKTS SFHVIGEIMD KVYTHGSLTS PASLDVQTVT VAPGGATVAE
VTFDVPGRYL LVDHALSRLE RGLVAMIEVE GPADTAIFNT GDAELSMAGH
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