Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_1006 |
Symbol | |
ID | 5456610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 1100186 |
End bp | 1101355 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640876577 |
Product | NnrS family protein |
Protein accession | YP_001412286 |
Protein GI | 154251462 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG3213] Uncharacterized protein involved in response to NO |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0347076 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGTGC CGCGTTATGC CTCGGCCGAT GCCTGGCCGC TTCTCTCGGC GGGCTTCCGG CCCTTCTTCC TTGCGGCCGG CCTCTGGGCC GCCTTCGCCA TGGTGCTGTG GATCCTGATG CTGCGCGGCA CCGTCGACCT GCCGACGGCA TTTTCGCCCG TCGTCTGGCA TTTCCACGAA TTACTGTTCG GTTTCGTCAC GGCGGCGATT GCGGGCTTTC TGCTCACGGC CATACCGAAC TGGACCGGCC GTCTGCCGCT GCAGGGCTGG CCGCTCGGCG GCCTCGTGCT GCTCTGGATC GCAGGGCGCG CGGCCATCGC CTTCTCGGCC GTTCTCGGGC CGGGCCTTGC CGCGGCTGTC GATCTCTCCT TTCTCATCGT CTTCGCCGCC GTGGTCGCGC GCGAGATTCT TGCCGGGCGC AACTGGCGCA ACCTTCCGGT GCTCGCCGCA CTTGCCGTGC TCATTGCCGC CAATGCGATG ATCCATGCGG GGGCCTTCGG GCATTACGAA TGGGAGGATG CGGGCAAGCG TCTCGCCATC GCCGTCGTGG TCATGCTGAT CACGCTGATC GGCGGCCGCA TCATTCCGAG CTTCACGGCG AACTGGCTTC GCCGCCGCAA GGCCGACGAG ATGCCGGCGC CTTTCGACCG TTTCGATCTT GCGGCGATGC TGATCGGTCT CGCGGCGCTG CTGATATGGG TGGCGAGCGG ACTGAACGCG GTCTCCGGTG CGGGACTGCT TATCGCCTCG GGCGCCCATG CGCTGCGGCT CGCACGCTGG CGGGGCGCGG CGACGCGGGA GGAACCGCTG CTCTGGATCC TTCATATCGG CTATGCCTGG CTGCCGCTGG GACTTGCCCT GCTCGGCCTC GCCGCCTGGC GGCCGGAGCT TGCCACCATC GCCATCCATG CGCTGACGGT CGGCGCCATG GGCACGATGA TCCTCGCCGT GATGACGCGG GCGAGCCTCG GCCACAGCAA GCGCGAGCTC ACCGCCGGGC GCGGCACGCT GATCTGCTAT CTTCTGGTGC TGGTGGCGGC GCTTGCGCGT CTCGCCGCGC CTTTTGCGGA CGGCTCCTAT GCCGCCGCGC TCGATCTTGC GGGCGGCGCC TGGATCGCGG CCTTCCTTCT CTTCGCCGCG CTCTACCTGC CGCTCTATAT CCGTCGCTGA
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Protein sequence | MPVPRYASAD AWPLLSAGFR PFFLAAGLWA AFAMVLWILM LRGTVDLPTA FSPVVWHFHE LLFGFVTAAI AGFLLTAIPN WTGRLPLQGW PLGGLVLLWI AGRAAIAFSA VLGPGLAAAV DLSFLIVFAA VVAREILAGR NWRNLPVLAA LAVLIAANAM IHAGAFGHYE WEDAGKRLAI AVVVMLITLI GGRIIPSFTA NWLRRRKADE MPAPFDRFDL AAMLIGLAAL LIWVASGLNA VSGAGLLIAS GAHALRLARW RGAATREEPL LWILHIGYAW LPLGLALLGL AAWRPELATI AIHALTVGAM GTMILAVMTR ASLGHSKREL TAGRGTLICY LLVLVAALAR LAAPFADGSY AAALDLAGGA WIAAFLLFAA LYLPLYIRR
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