Gene Plav_1006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1006 
Symbol 
ID5456610 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1100186 
End bp1101355 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content68% 
IMG OID640876577 
ProductNnrS family protein 
Protein accessionYP_001412286 
Protein GI154251462 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3213] Uncharacterized protein involved in response to NO 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0347076 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGTGC CGCGTTATGC CTCGGCCGAT GCCTGGCCGC TTCTCTCGGC GGGCTTCCGG 
CCCTTCTTCC TTGCGGCCGG CCTCTGGGCC GCCTTCGCCA TGGTGCTGTG GATCCTGATG
CTGCGCGGCA CCGTCGACCT GCCGACGGCA TTTTCGCCCG TCGTCTGGCA TTTCCACGAA
TTACTGTTCG GTTTCGTCAC GGCGGCGATT GCGGGCTTTC TGCTCACGGC CATACCGAAC
TGGACCGGCC GTCTGCCGCT GCAGGGCTGG CCGCTCGGCG GCCTCGTGCT GCTCTGGATC
GCAGGGCGCG CGGCCATCGC CTTCTCGGCC GTTCTCGGGC CGGGCCTTGC CGCGGCTGTC
GATCTCTCCT TTCTCATCGT CTTCGCCGCC GTGGTCGCGC GCGAGATTCT TGCCGGGCGC
AACTGGCGCA ACCTTCCGGT GCTCGCCGCA CTTGCCGTGC TCATTGCCGC CAATGCGATG
ATCCATGCGG GGGCCTTCGG GCATTACGAA TGGGAGGATG CGGGCAAGCG TCTCGCCATC
GCCGTCGTGG TCATGCTGAT CACGCTGATC GGCGGCCGCA TCATTCCGAG CTTCACGGCG
AACTGGCTTC GCCGCCGCAA GGCCGACGAG ATGCCGGCGC CTTTCGACCG TTTCGATCTT
GCGGCGATGC TGATCGGTCT CGCGGCGCTG CTGATATGGG TGGCGAGCGG ACTGAACGCG
GTCTCCGGTG CGGGACTGCT TATCGCCTCG GGCGCCCATG CGCTGCGGCT CGCACGCTGG
CGGGGCGCGG CGACGCGGGA GGAACCGCTG CTCTGGATCC TTCATATCGG CTATGCCTGG
CTGCCGCTGG GACTTGCCCT GCTCGGCCTC GCCGCCTGGC GGCCGGAGCT TGCCACCATC
GCCATCCATG CGCTGACGGT CGGCGCCATG GGCACGATGA TCCTCGCCGT GATGACGCGG
GCGAGCCTCG GCCACAGCAA GCGCGAGCTC ACCGCCGGGC GCGGCACGCT GATCTGCTAT
CTTCTGGTGC TGGTGGCGGC GCTTGCGCGT CTCGCCGCGC CTTTTGCGGA CGGCTCCTAT
GCCGCCGCGC TCGATCTTGC GGGCGGCGCC TGGATCGCGG CCTTCCTTCT CTTCGCCGCG
CTCTACCTGC CGCTCTATAT CCGTCGCTGA
 
Protein sequence
MPVPRYASAD AWPLLSAGFR PFFLAAGLWA AFAMVLWILM LRGTVDLPTA FSPVVWHFHE 
LLFGFVTAAI AGFLLTAIPN WTGRLPLQGW PLGGLVLLWI AGRAAIAFSA VLGPGLAAAV
DLSFLIVFAA VVAREILAGR NWRNLPVLAA LAVLIAANAM IHAGAFGHYE WEDAGKRLAI
AVVVMLITLI GGRIIPSFTA NWLRRRKADE MPAPFDRFDL AAMLIGLAAL LIWVASGLNA
VSGAGLLIAS GAHALRLARW RGAATREEPL LWILHIGYAW LPLGLALLGL AAWRPELATI
AIHALTVGAM GTMILAVMTR ASLGHSKREL TAGRGTLICY LLVLVAALAR LAAPFADGSY
AAALDLAGGA WIAAFLLFAA LYLPLYIRR