Gene Plav_1005 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_1005 
Symbol 
ID5456740 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1099773 
End bp1100183 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content64% 
IMG OID640876576 
Producthypothetical protein 
Protein accessionYP_001412285 
Protein GI154251461 
COG category[S] Function unknown 
COG ID[COG3094] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0820181 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones61 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAGT TCTATGCCGA GATCCGGCTC GTCCATATCT GGAGCGTGAT CGCGAGCGGT 
TCGCTCTTCG CCATGCGCGG GCTTGCGCTC TTTGCGGGCG CTGGCGGAAC GGGGGAGCGC
CTCGCCATGG CGGCGCCGGT CCGTCTCCTC TCCTACACGA TCGACACGGT GCTGCTCACC
GCCGCGCTGA TGCTGATGAC GATCGTACAG CAATATCCCT TCATCGATCA CTGGCTGACC
GTGAAGGTCG TGTTGCTCGT GGTCTATATC GCGCTCGGCA TGATGGCCTT CCGCTTCGGG
CGGACGAGGG GCCAGCGGAT CGGCGCCTTC GCGGCGGCGC TCGCGGTCTT CCTCTATATC
GTCTCGGTGG CGCTGGCGCA TGACCCGGCT GGCATCTTCA GCAGCCTCTA G
 
Protein sequence
MIEFYAEIRL VHIWSVIASG SLFAMRGLAL FAGAGGTGER LAMAAPVRLL SYTIDTVLLT 
AALMLMTIVQ QYPFIDHWLT VKVVLLVVYI ALGMMAFRFG RTRGQRIGAF AAALAVFLYI
VSVALAHDPA GIFSSL