| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0984 |
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| Symbol | |
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| ID | 5453788 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1064681 |
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| End bp | 1065865 |
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| Gene Length | 1185 bp |
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| Protein Length | 394 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876555 |
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| Product | Rieske (2Fe-2S) domain-containing protein |
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| Protein accession | YP_001412264 |
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| Protein GI | 154251440 |
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| COG category | [P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG4638] Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.575491 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCA AGATTCTCAC CGATGCGTTC TTCGATGGGT TCAGCAGTTC TCTCGGAGAT
GTCACCGAAG CGGAAACGCT GCCACCCGCC TGCTATACGG ACGAGGAATT CTTCGAATTC
GAGAAGGAAG CCCTTTTCAA TCGCGAATGG CTCTGCGTGG GTCGCGTGGA CTGGGTGAAG
AACCCGGGTG ACTATTTCAC CGCCACGCAT ATCGGCGAGC CCCTTATCGT TTCGCGCACG
CGCGAGGGCG AGTTGAAAGC CATGTCGGCC GTCTGCCAGC ACCGTGCCAT GCTCGTGGCA
GAGGGGCGCG GCAACACCAA GGCTTTCGTC TGTCCCTATC ACCACTGGAC CTATGGCCTC
GACGGCCGCC TTGTCGGCGC GCCCGCCATG AGCAAGACCT GCGACTTCGA CCGCAACGAT
GTGGGCCTAC CCGAGATCAA GACGGAAGTC TGGGAGGGTT TTGTCTTCGT CAATTTCGAT
GAGGATGCGC CGCCGCTCAC ACCGCGCCTC AAGACGGTGA GCGAGGCACT CGCGAATTAC
GACCTTCCGA ATGCCGAAGG CGCTGTTCCG GACGAGCCCC AGAGCTATCC ATGGAACTGG
AAGGTCATGA TGGAGAACAA CAATGACGGG TATCATGCCA CCCGTCTTCA CAAGGGTCCG
CTCCATGACT TCATTCCGAG CGAGCTTGCG ACCTTCCCGG AGATGCCGGA GGGAAGTGCC
GGCTATCTGC GCTTCAACGG CACGCTTCAT CCCGATGCCG CATTCAACCC GCTGCAGAAG
GCCGTCCTAC CCGTCTTCCC GAAGCTGACT GCCGAGGAGC GCCACCGGGC GATGTTCGCG
AATATTCCCC CGACACTCTC TCTGGTCGTC ACATCCGACA TGGTGATCTA TCTCATCCTG
CATGCGGAAT CGGCCGGACG GCATTCCATG ACCATTGGCT GGCTTGTTGC GCCGGGCGCC
ATGTCCGAAC CGCTCTTCCA GGAACGCCTC GATATGAACA TGCGCAGCGC CATGGAAATC
ACCGAGCAGG ATCTCCATGT AGACAGACTG GTGCAGATCG GCCTCAAATC CCGCTTTTCC
GTCCGCGGCC GATATTCTTG GCAGGAGCGC GCGCAGAGCG ATCTCAACCA TTGGCTTGTC
TCGCGCTACC GGCAGGAATG GCAGCGCCGC AAGGCATTCG CGTGA
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| Protein sequence | MSSKILTDAF FDGFSSSLGD VTEAETLPPA CYTDEEFFEF EKEALFNREW LCVGRVDWVK
NPGDYFTATH IGEPLIVSRT REGELKAMSA VCQHRAMLVA EGRGNTKAFV CPYHHWTYGL
DGRLVGAPAM SKTCDFDRND VGLPEIKTEV WEGFVFVNFD EDAPPLTPRL KTVSEALANY
DLPNAEGAVP DEPQSYPWNW KVMMENNNDG YHATRLHKGP LHDFIPSELA TFPEMPEGSA
GYLRFNGTLH PDAAFNPLQK AVLPVFPKLT AEERHRAMFA NIPPTLSLVV TSDMVIYLIL
HAESAGRHSM TIGWLVAPGA MSEPLFQERL DMNMRSAMEI TEQDLHVDRL VQIGLKSRFS
VRGRYSWQER AQSDLNHWLV SRYRQEWQRR KAFA
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