| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0983 |
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| Symbol | |
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| ID | 5456151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1063863 |
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| End bp | 1064654 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876554 |
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| Product | extradiol ring-cleavage dioxygenase class III protein subunit B |
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| Protein accession | YP_001412263 |
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| Protein GI | 154251439 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3384] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 0.793849 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACGA ACAAAATCAG GCCGCAGCCC GCAATCTTTT TCGGGCATGG CAGTCCCGGA
AACGTGATGG AGGACAACTT CATCACCCGC ACCTGGGAGA ATCTCGGGCG CGAATTCGGC
AAGCCCAAGG GTATCATCTG CATTTCCGCG CATTGGTATA CGCGCGGCGT TCGCGTGACG
GCGGGCGCCC ATCCCGGCAC GATCCATGAC TTCGGCGGCT TCCCGAAGGC GATGTATGAC
ATGCGTTACC CCGCCCCCGG CAGCCCTGCC CTCGCCGCCG CCATCCGCGA GAGGCTCGCG
CCGCTCGATG TCGAGCTCGA CGAGGAGCGC GGCTTCGACC ACGGCTCGTG GTGCGTGCTC
GCGAAGGTCT TTCCGGAGGC CGATGTGCCG CTCGTGCAGG TCGGCATGGA TGCTTCGCTC
TCGCCCTCCC GGCATTTCGA AATCGGCAAG GCGCTTGGCG CATTCCGCGA CGAGGGCTAC
CTCCTCATGG GTAGCGGCAA TATCGTGCAT AACCTGCCGG AGATGGACTG GCAGATGCGC
GACGGCAGCT ATGAATGGGC AGGCCGTTTC GGCGACTATA TTCGCGGCAG CATTGCGAGC
GACACGCCTG CAAATTTGAT CGACTACACG TCTCAAAACC GCGACGCGCT GCTTTCCGTT
CCACATCCCG ACCACTACCT GCCGCTTCTC TACGTCATGG GCGCGCGGCG CGAAAACGAT
CCTGTGCGGT TCGAAACCCC GATCGTGGAA TACGGCTCTC TCGACATGAC AACTGTCGTT
GTCGGCGGCT GA
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| Protein sequence | MQTNKIRPQP AIFFGHGSPG NVMEDNFITR TWENLGREFG KPKGIICISA HWYTRGVRVT
AGAHPGTIHD FGGFPKAMYD MRYPAPGSPA LAAAIRERLA PLDVELDEER GFDHGSWCVL
AKVFPEADVP LVQVGMDASL SPSRHFEIGK ALGAFRDEGY LLMGSGNIVH NLPEMDWQMR
DGSYEWAGRF GDYIRGSIAS DTPANLIDYT SQNRDALLSV PHPDHYLPLL YVMGARREND
PVRFETPIVE YGSLDMTTVV VGG
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