| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0982 |
|---|
| Symbol | |
|---|
| ID | 5456729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 1062592 |
|---|
| End bp | 1063671 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640876553 |
|---|
| Product | acetamidase/formamidase |
|---|
| Protein accession | YP_001412262 |
|---|
| Protein GI | 154251438 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG2421] Predicted acetamidase/formamidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 53 |
|---|
| Fosmid unclonability p-value | 0.555434 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGTATT CTGTGATCCC GGGATCGAAG GCGGCTTCCC ACGCCCATCC CACAGCCCTC
CATCTCCTCA GGGCCACGCC GGAGACCTGC CACTGGGGTT ATTTCGATCC GTCCCTCGCC
CCCGTTCTCA CGGTCAATAG CGGCGATCTC GTCCAGGTCG AGGCCGTCAC GCATCATGCG
GGCGATGCGC CGGACCTGAT GATGGACGAG GCGGTGCGCC ACATCTACGA CACCATCCCC
GAGAGCGACC GCAATCCCGG CGTTCACCTG ATGACCGGCC CGATCTACGT CAAGGATGCA
AAGCCGGGCG ACATGCTGGA GGTGCGCTAC CTTCGCATGG TCCCGCGTTT CGATTATGGC
TCGAACCTCG CCGCGAACTG GGGCCATCTC TACAAGGAAT TCGGCGAGAA GGAGCGCGTG
ACCATCTACA GGCTCGACCG CTCGACGAAT CTTGCGGAAG CGCACTACGC CTATGATTAC
CCCGGCCTCT ACGATACGCC GGGCAAGATC ACCAGCTGCC CGGAATGCGA CCGGCAGACG
GCGCTGAACG GCGTACGCGT GCCGGTGCGC CCGCATCTCG GCACGGCGGG CGTCGCACCC
GATGTGCCCG GCCGCGTCAG CACTATCCCG CCGGGCGCGC ATGGCGGCAA CATCGACAAT
TGGCGCATCG GCGCGGGTGC GACGATGTTC TATCCCGTCG CAGTGGATGG CGGCCTCTTT
TCGGTCGGCG ATCCACATAT CTCGCAAGGC GACGGCGAGA TCAGCGGCAC GGCCATAGAA
GCCTCGCTCG ACGTTCTCTT CCAGATCGTG CTCCGCAAGG ATTTCGAGTT TCCCTCGCCG
CTTCTCGAAA CGCCGAACTA CTGGATCGTC CATGGCTTCG ACGAGGATCT GAACGTCGCC
ATGCGCAACG CCTCGCTCGA CATGCTGAAA TTCCTTCATG ACGAGCGCGA TCTCAGCAAG
GACGACGCCT ATTCGCTGAT GAGCGTTTCC GCGGACTTTA CGGTTACCCA GGTGGTGGAT
GGAAGGCAGG GCGTGCATGT GCGGATGCCG CGCAGCATCT TTGCGCCGGG CCGTAAATAG
|
|---|
| Protein sequence | MAYSVIPGSK AASHAHPTAL HLLRATPETC HWGYFDPSLA PVLTVNSGDL VQVEAVTHHA
GDAPDLMMDE AVRHIYDTIP ESDRNPGVHL MTGPIYVKDA KPGDMLEVRY LRMVPRFDYG
SNLAANWGHL YKEFGEKERV TIYRLDRSTN LAEAHYAYDY PGLYDTPGKI TSCPECDRQT
ALNGVRVPVR PHLGTAGVAP DVPGRVSTIP PGAHGGNIDN WRIGAGATMF YPVAVDGGLF
SVGDPHISQG DGEISGTAIE ASLDVLFQIV LRKDFEFPSP LLETPNYWIV HGFDEDLNVA
MRNASLDMLK FLHDERDLSK DDAYSLMSVS ADFTVTQVVD GRQGVHVRMP RSIFAPGRK
|
|---|
| |