Gene Plav_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0971 
Symbol 
ID5454564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1049633 
End bp1050361 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content61% 
IMG OID640876542 
Producthypothetical protein 
Protein accessionYP_001412251 
Protein GI154251427 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value0.694676 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAGAT GCACAGCACC AGTGAGAGGT CATCGCTCAG CGGCCGCTGC TGCGGATTGC 
CCAGCATGTG GTAGCCGCTA TGGCCGAGGC TACAGCAGCT ACGGGTACTC GCGCCAATCC
TCTACCCCGT CCTACTCTAC TCCATCCTAC TTCTCGTCAG GGAGCAGTGG CGGCGGTCGA
AGCCGCGGTG GCGGTAGCAG TTCCCCTCGC ACCACCAAAC CGCGCTGGTC GAGCGCCGTT
TCGTCTCAGT TTTACACGAC CGAGGAAGTA AGGGCGCTCA CGCCAATCCG CGAGACCGTC
GAGAAGCGAG CGTCCCTGCC CGATCTTCGG CACATATTTC TGTGCCACGC GTGGGATGAC
CGGCAGGGCG TTGCCAAGGA GTTGTATGAT CTGCTCGTGT CACGCGATGT CTCGGTCTGG
TTCAGCGAGA ATGACATTGG CCTCGGCGAA CCATTCCTCC GCGCTATCGA CAAGGGCTTG
GCGAAGTCCC GGGTAGGGAT TGTGCTGGTG ACCCCGGCGC TGCTGAAGCG TCTTCCCGCA
GCAGGTGTAG CTGACAAGGA GCTTTCAGTA CTTCTAGCGC GTGACCAACT CGTTCCCATC
GTGCATAACA CAACGTACGA AGCTCTCCGC GAAGTAAGCC CAATGCTCGC CTCGCGAAAC
GGCCTGGACA CTGCAGAAAT GCCAATGGCT GACGTCGCGG CTAAGCTCGC CGAGCTGGTG
GCCGTCTAA
 
Protein sequence
MARCTAPVRG HRSAAAAADC PACGSRYGRG YSSYGYSRQS STPSYSTPSY FSSGSSGGGR 
SRGGGSSSPR TTKPRWSSAV SSQFYTTEEV RALTPIRETV EKRASLPDLR HIFLCHAWDD
RQGVAKELYD LLVSRDVSVW FSENDIGLGE PFLRAIDKGL AKSRVGIVLV TPALLKRLPA
AGVADKELSV LLARDQLVPI VHNTTYEALR EVSPMLASRN GLDTAEMPMA DVAAKLAELV
AV