Gene Plav_0968 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0968 
Symbol 
ID5454549 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1047300 
End bp1047737 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content66% 
IMG OID640876539 
ProductMarR family transcriptional regulator 
Protein accessionYP_001412248 
Protein GI154251424 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value0.798685 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAA AAGACACATA CGAAACCACC GCCCATATCC GCGACAACTG CCTCTGCCTG 
CATGCGCAGC GCGCCGCCCG CGCGCTCGCC CGCCGCTTCG ACGAGGTGCT TCGCCCGCAT
GGGATCACCA GCGGCCAGTT CTCGCTCCTC AATGTGCTGA ACAGACCCTC GCCGCATTCG
ATGGGCCCGG TCGCGAAGTT CCTCGCGATG GACCGCTCGA CGCTGACGGC AAACCTGAAG
CCGCTCGAAC GCGATGGCCT CGTTTCCGTC GCCATAGACC CGGAGGACAG GCGCGGCCGC
AAGCTCGCGC TCACCCCCAA GGGCCGCAAG GTGCTCCGCG CCGCGATGAA GGTCTGGAAA
AGCGAACACG CCGCCCTCGA ACGCGAAATG GGCGTCGATC CCGAACCCGT CCGCGTCGGC
CTCCGCGCGA TTGCGTGA
 
Protein sequence
MIEKDTYETT AHIRDNCLCL HAQRAARALA RRFDEVLRPH GITSGQFSLL NVLNRPSPHS 
MGPVAKFLAM DRSTLTANLK PLERDGLVSV AIDPEDRRGR KLALTPKGRK VLRAAMKVWK
SEHAALEREM GVDPEPVRVG LRAIA