Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0962 |
Symbol | |
ID | 5456956 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 1041139 |
End bp | 1041636 |
Gene Length | 498 bp |
Protein Length | 165 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640876533 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001412242 |
Protein GI | 154251418 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 0.100112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGGGCA AAAACAGGAA AGCCGTTCCC GACAGGGAAT TCGGCTGGCT TCACCGCGAT GTGTTCCGGC TCTTCAAGCG CGCCTGGGAA AACCGCCTGC GCGCCTCGGG CACCGGCATC ACCATGCCGC AATCCCGGGT TTTCGCGGAA TTGCGCCAGC AGGATGGCGT CACCCAGACG GAGCTGGCCG ATCTTGTGAT GATGGAAAAG GCGCCGCTCG GCCGCCTGCT GGACCGGATG GAGGAACTGG GCCTCATCAC GCGCCGCCCG GACCCGGCAG ACCGCCGCGT CCGCCGCGTC TATCTCACCG ATGCCATCGA CGGCTTTCAC GACGAATTGT GGGACGCCGC CTTCGGCATG TTCGGCGACG CCCTCAAGGG CTTCACGGCG GAAGAATACG AAACCCTCGT CGCCATGCTC CGCCGCATCA AGGAAAACCT CGAAGCCGTG GAGCGGAATA CGCCGCAGGA AGAAAGCGCC AGCCGCGCCG ATGCTTGA
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Protein sequence | MAGKNRKAVP DREFGWLHRD VFRLFKRAWE NRLRASGTGI TMPQSRVFAE LRQQDGVTQT ELADLVMMEK APLGRLLDRM EELGLITRRP DPADRRVRRV YLTDAIDGFH DELWDAAFGM FGDALKGFTA EEYETLVAML RRIKENLEAV ERNTPQEESA SRADA
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