| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0951 |
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| Symbol | |
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| ID | 5456528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 1025667 |
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| End bp | 1026323 |
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| Gene Length | 657 bp |
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| Protein Length | 218 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876522 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001412231 |
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| Protein GI | 154251407 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 0.941158 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 56 |
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| Fosmid unclonability p-value | 0.954881 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCCGGC GCCCTTTCGT GCGACCGGTC AGGATACAAA GTCCGGTGCC AGCCGCCGGC
ACAAGGGGAT GCAGCTGGTT GGACGAGCCG TCGGATGATG AACTGGTAGC CGCCGTTGCC
TTGGGCGATG AGGCGGCATG CCGCGAGCTT ATGAACCGGC ACTTGCCGCG CATCACCGCC
CTCGGCCGCA GGATGCTCGG CAGCCAGGCC GATGCGGAGG ATGTGGCGCA AGAGGTGTTC
CTCCGCGTCT GGACCAATGC CGGCAAGTGG GAGCCGGGCA GGGCGCAATT CAGCACCTGG
CTCCACCGCG TCGCCACCAA TCTCTGCCTC GACCGCCTGC GGAAGAATCG CGGCGGTACC
GAGGATATCG ACGCCATCCC GGAGCCCGCC AGCGAAGAGC CCGGTCCCGA TCGCCGTCTC
GAGCAGAGCG AACTCGCGGA GCGCGTCGAG GCCGCTCTTC AGGCCCTGCC GGAGCGTCAG
CGGGCCGCCA TCGTCCTCTC GCACTATCAG GGCCTCACCA ATATAGAGGC CGCGGAAATC
CTCGGGATAA CGGTCGAGGC CGTGGAATCC CTTCTCTCCC GCGCAAGACG GCAATTACGT
GGCAGTCTGG CGACGGAAAA AGGCGAGTTG CTGCGTTCAA AGGACATGAG CACCTGA
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| Protein sequence | MSRRPFVRPV RIQSPVPAAG TRGCSWLDEP SDDELVAAVA LGDEAACREL MNRHLPRITA
LGRRMLGSQA DAEDVAQEVF LRVWTNAGKW EPGRAQFSTW LHRVATNLCL DRLRKNRGGT
EDIDAIPEPA SEEPGPDRRL EQSELAERVE AALQALPERQ RAAIVLSHYQ GLTNIEAAEI
LGITVEAVES LLSRARRQLR GSLATEKGEL LRSKDMST
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