Gene Plav_0942 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0942 
Symbol 
ID5455971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp1012800 
End bp1013273 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content64% 
IMG OID640876513 
Productcytochrome C biogenesis protein 
Protein accessionYP_001412222 
Protein GI154251398 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG3088] Uncharacterized protein involved in biosynthesis of c-type cytochromes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0762441 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones57 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGTT GGGTCACAGT CCTGTTTCTG GTACTTGCGC TGGCGGCGCC GGCCCATGCG 
GCGATCGATC CGGGGGAGCG CCTGGCCGAT CCTGCGCTTG AAGCCCGCGC CCGCGACCTG
TCAAAAGAAC TTCGCTGTCT CGTCTGCCAG AACCAGTCCA TTGACGATTC CGACGCCGAA
CTTGCCCAGG ACCTGCGCCG GCTGGTCCGG CAGCGGCTCG CCGCCGGCGA CAGCAATGCG
GAAGTGCTCG ATTATGTTGT CGAACGCTAC GGCGAATTCG TCTTGATGAC GCCCCGTTTC
AAGCCATCTA CCTGGGTGCT CTGGCTCGGG CCGCTCTCGG TTCTGCTGGT CGGTGGCGGA
ACCGTCTTTC TCGTACTCCA CCGGCATCGT GGCCGCCGCG CAGACCCTGC GCTTACATCC
GAGGAAGCCG CCCGCGTGGC CGCACTGATG GATGAGCGAA AACTGAACGG CTGA
 
Protein sequence
MFRWVTVLFL VLALAAPAHA AIDPGERLAD PALEARARDL SKELRCLVCQ NQSIDDSDAE 
LAQDLRRLVR QRLAAGDSNA EVLDYVVERY GEFVLMTPRF KPSTWVLWLG PLSVLLVGGG
TVFLVLHRHR GRRADPALTS EEAARVAALM DERKLNG