| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0935 |
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| Symbol | |
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| ID | 5456088 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 1002561 |
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| End bp | 1003784 |
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| Gene Length | 1224 bp |
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| Protein Length | 407 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876506 |
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| Product | L-carnitine dehydratase/bile acid-inducible protein F |
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| Protein accession | YP_001412215 |
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| Protein GI | 154251391 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1804] Predicted acyl-CoA transferases/carnitine dehydratase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 0.815426 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTCGGGA AGAGCGAAGG GGGAAAAGGT GTTCTGTCGG GCGTGCGGGT CCTCGATTTC
GGCCGCTATA TCGCCGGGCC TTACTGCGCT GCTCTCTTGG GCGATCTTGG TGCGGAAGTG
ATCCGCATCG AGAAGCGGGA GGGCAGCGAG GACCGCTTCG TGCAACCGAT CGTGCCGGAG
GCGGGACCGG GCGAAGGCGG CGAAGGCGCC ATGTTCCTGC AGATGAACCG GAACAAGCGA
GGCCTCACAC TGGACCCCAT GACGGAAACA GGGCGCGGCA TTGTCCGCCG CCTGGTCGCC
ACAGCTGATG TGGTCGTCGC CAATCTGCCG CCTTCCACAC TGAAGGCGAT GGGCCTTGAT
TATGAGAGTC TGACGGCCGT AAAGCCCGAC ATCATCCTGA CGACAGTGTC CGCCTTCGGG
CATGGTGGCC CCTATAGCGA GCGCACCGGC TTTGACGGCG TGGCGCAATC CATGGTCGGC
GCCGCTTACC TGACGGGTTA TCCCGAAGAG CCGGTCAAAA GCTACGCGCC CTGGGTCGAT
TTCGGCACCG CCTCCCTCTC GGCTTTCGGC ACAATGGCAG CCCTGATGGA GCGGGCACAA
TCGGGGAAGG GGCAGATAGT CGAGGGATCT CTTCTTTCCA CAGCGCTCGC CTATTTCAAT
TTTCATCTAA TCGAACAGGA CCTCCGGCAG ACGAACCGTG TCGCCATCGG CAACCGCTCC
CCTTATGCAG GACCGGCCGA CATCGTGCGG ACCAAAGATG GATGGATATT GGTCCAGGCG
ATCGGACAAC CTCTTTTCAA GCGATGGGCA AGGCTGATGG GCGAAGATCA CTGGCTCAGC
GACCCGCGCT TCAAGGACGA CCTTGCGCGC GGAGACAACG GCAAGCTGCT GTCCGAACGG
ACATCGCGCT GGGCCGAAAC ACGCACCACG GAAGAAGCAC TCTCCGAACT GGAGAAAGCG
CGCATTCCGG CTGGTCCAGT CTATACGCCG CAACAGGCAC TTGATGACCG GCACATCGCC
GCCATGGGTT ATCTGCATCC GTTGGGATTT CCGGGCATGC CCAAGCCCGC CCCGATCATG
GAAGCGCCGA TACGCATGTC GCGCACCCCC GGAACGATCC GCGAGCGGGC GCCGGTTCTG
GGCGAACATA CAGAGACGAT ATTGGAAGAT CTTGGTTATG CGCCCGACGA AATCGCCGCG
TTCCGAGCTG AGGGAGTGAT CTGA
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| Protein sequence | MVGKSEGGKG VLSGVRVLDF GRYIAGPYCA ALLGDLGAEV IRIEKREGSE DRFVQPIVPE
AGPGEGGEGA MFLQMNRNKR GLTLDPMTET GRGIVRRLVA TADVVVANLP PSTLKAMGLD
YESLTAVKPD IILTTVSAFG HGGPYSERTG FDGVAQSMVG AAYLTGYPEE PVKSYAPWVD
FGTASLSAFG TMAALMERAQ SGKGQIVEGS LLSTALAYFN FHLIEQDLRQ TNRVAIGNRS
PYAGPADIVR TKDGWILVQA IGQPLFKRWA RLMGEDHWLS DPRFKDDLAR GDNGKLLSER
TSRWAETRTT EEALSELEKA RIPAGPVYTP QQALDDRHIA AMGYLHPLGF PGMPKPAPIM
EAPIRMSRTP GTIRERAPVL GEHTETILED LGYAPDEIAA FRAEGVI
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