Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0926 |
Symbol | |
ID | 5454918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 993747 |
End bp | 994418 |
Gene Length | 672 bp |
Protein Length | 223 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640876497 |
Product | nitroreductase |
Protein accession | YP_001412206 |
Protein GI | 154251382 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 60 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGTTT CGGAAGCTTT GAAGAGCCGT ATCACCTGCC GGGCCTTTCT AGACACGCCG GTGCCGGAAG AGACGGTCCG GAAAATTCTC GAAGAGGCGA AGTATGCACC GTCGGGCGGC AATCTGCAGC CATGGCATGC CTATGTCGTC GGCGGGGAGA GGCTGAAGGA GTTTCTCGCC ATCATTGCCG AGAAGCAGCA GACGGCACCG TTCGGCGAGG GCACCGAGTA CGACATCTAT CCCAAGGGCC TGAAGGAACC TTACAAGGGA CGCCGGTTCA AATGCGGCGA GGACATGTAT GCGACGATCA ACGTCACGCG TGAGGACAAG ACGGGGCGGC TCCAGCAGTT CGCCCGTAAT TTCCGCTTCT TCGATGCGCC CGTCGGAATA TTTTTCGCAA TCGACCGGCA GATGGGGCTC GGCCAGTGGT CCGACCTCGG AATGTTCATC CAATCGGTGA TGCTTGCAGC GCGCGAGCAT GGCCTGCACA CATGTCCCCA GGAAGCCTGG GCCATCTGGC ACAAGACTGT CTCGGAGTTT GTCGGCATCC CGGAAGAGCT TATGCTCTTC TGTGGACTGG GACTGGGCTA TATGGATGAG AGCGCTGCCA TTAATCAATT GCGGACGGAC CGTGCTCCCC TGGAGGAGTT CGCGACATTC AGCGGGTTTT GA
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Protein sequence | MKVSEALKSR ITCRAFLDTP VPEETVRKIL EEAKYAPSGG NLQPWHAYVV GGERLKEFLA IIAEKQQTAP FGEGTEYDIY PKGLKEPYKG RRFKCGEDMY ATINVTREDK TGRLQQFARN FRFFDAPVGI FFAIDRQMGL GQWSDLGMFI QSVMLAAREH GLHTCPQEAW AIWHKTVSEF VGIPEELMLF CGLGLGYMDE SAAINQLRTD RAPLEEFATF SGF
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