Gene Plav_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0926 
Symbol 
ID5454918 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp993747 
End bp994418 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content58% 
IMG OID640876497 
Productnitroreductase 
Protein accessionYP_001412206 
Protein GI154251382 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones60 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTT CGGAAGCTTT GAAGAGCCGT ATCACCTGCC GGGCCTTTCT AGACACGCCG 
GTGCCGGAAG AGACGGTCCG GAAAATTCTC GAAGAGGCGA AGTATGCACC GTCGGGCGGC
AATCTGCAGC CATGGCATGC CTATGTCGTC GGCGGGGAGA GGCTGAAGGA GTTTCTCGCC
ATCATTGCCG AGAAGCAGCA GACGGCACCG TTCGGCGAGG GCACCGAGTA CGACATCTAT
CCCAAGGGCC TGAAGGAACC TTACAAGGGA CGCCGGTTCA AATGCGGCGA GGACATGTAT
GCGACGATCA ACGTCACGCG TGAGGACAAG ACGGGGCGGC TCCAGCAGTT CGCCCGTAAT
TTCCGCTTCT TCGATGCGCC CGTCGGAATA TTTTTCGCAA TCGACCGGCA GATGGGGCTC
GGCCAGTGGT CCGACCTCGG AATGTTCATC CAATCGGTGA TGCTTGCAGC GCGCGAGCAT
GGCCTGCACA CATGTCCCCA GGAAGCCTGG GCCATCTGGC ACAAGACTGT CTCGGAGTTT
GTCGGCATCC CGGAAGAGCT TATGCTCTTC TGTGGACTGG GACTGGGCTA TATGGATGAG
AGCGCTGCCA TTAATCAATT GCGGACGGAC CGTGCTCCCC TGGAGGAGTT CGCGACATTC
AGCGGGTTTT GA
 
Protein sequence
MKVSEALKSR ITCRAFLDTP VPEETVRKIL EEAKYAPSGG NLQPWHAYVV GGERLKEFLA 
IIAEKQQTAP FGEGTEYDIY PKGLKEPYKG RRFKCGEDMY ATINVTREDK TGRLQQFARN
FRFFDAPVGI FFAIDRQMGL GQWSDLGMFI QSVMLAAREH GLHTCPQEAW AIWHKTVSEF
VGIPEELMLF CGLGLGYMDE SAAINQLRTD RAPLEEFATF SGF