| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0923 |
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| Symbol | |
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| ID | 5453469 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 990722 |
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| End bp | 991513 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876494 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412203 |
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| Protein GI | 154251379 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 0.148481 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 63 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTTGA AGCTCACCGG AAAACGGGCG CTGGTCTCGG GCTCTCACCG GGGCACCGGG
CGGGCGATTG CGCATGCATT GGCGCGCGAA GGCGCCGAAA CGCTTGTCCA TGGTTTTGAT
CTTGCCGCGG CTGAAATCGT TGCCGCCGAA ATCCGCGATC TGGGTTTTGC CGCTCATGCT
GTCGCGGGCG ACATCATGAC GGACACCGGC GCGGCGGACG TCATCGGCGC GGCCGGCGAG
ATCGACATCC TCATCAACAA TTACGGGACG GCGGAAGCCG GTTCGTGGAC CAAGTCGGAA
ACGGCCGACT GGATCGACGC CTATGAGAAG AATGTGCTGT CGGCCGTGCG GCTGACACGC
GGGCTGATGG GCGGGATGAA AAAGCGCGGC TGGGGCCGCA TCATCATGCT GGGCACGATC
GGCTCCACGG AGCCCGCCGC GCGCATGCCG CATTATTATG CGTCCAAGGG GGCGCTTGCG
ACGATGACCA TTTCACTCGC GAAGGAGCTG GCGGGAACGG GGATCACGGT CAATCTGGTT
TCGCCCGGCT TGATCCGCAC AAAGGAAGTA GAGGAACGCT TTCTTTCGCA AGGGCGCGAG
CGCGGCTGGG GCACGACCTG GGAAGAGGTC GAGCCGCATT TTCTGAAGAA CTTCATGGGC
AATCTGACCG GACATATTCC GCTGCCAGAC GAAATCGCCG ACATCGTGGC CTTTGTGGCG
AGCCCGCTTG CGGGGGCCAT CCATGCGCTC AACATGCGGA TCGACGGCGG CTCAACGGCG
CTGGTCACAT AA
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| Protein sequence | MDLKLTGKRA LVSGSHRGTG RAIAHALARE GAETLVHGFD LAAAEIVAAE IRDLGFAAHA
VAGDIMTDTG AADVIGAAGE IDILINNYGT AEAGSWTKSE TADWIDAYEK NVLSAVRLTR
GLMGGMKKRG WGRIIMLGTI GSTEPAARMP HYYASKGALA TMTISLAKEL AGTGITVNLV
SPGLIRTKEV EERFLSQGRE RGWGTTWEEV EPHFLKNFMG NLTGHIPLPD EIADIVAFVA
SPLAGAIHAL NMRIDGGSTA LVT
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