Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0920 |
Symbol | |
ID | 5454285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 988784 |
End bp | 989500 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 640876491 |
Product | hypothetical protein |
Protein accession | YP_001412200 |
Protein GI | 154251376 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 64 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCTGACA GTACTCATCT CGGCCTGCCA TATCTGGAAG CGGCGCAGGC GCAAAAGCAT GTGACCGTGA ACGAGGCGCT GCGGCGGCTC GACGCGCTGG TGCAGCTCTC CATTGTTTCG CGCAGCCTTG CCACACCGCC GGACGCGCCC GAAGAGGGCG CACGCTATAT CGTGGCGCCT TCACCGACCG ATATGTGGGA GGGACGCGCG GGCAAGGTTG CGGCCTTCAT CGACGGGGCA TGGGTCTTTT TCATGCCGGG CGATGGCTGG CGCGCCTGGG ACGAGGAGGC CGGAGAACTT CTCGTCCGGT CCGGCGGTAC GTGGAATACG GTCGGCGGCG CGGGTGGACC CACCAGTGCC CACGGCGCGA CAACGCGCAT GAGCATTGTC GAGGGCGACC ATGTGCTGGC GGCGGGCACA GCCTCGACGC CCGATTTCAT GATCCCGGAC CGAGGCATCG TGCTCGGCGT TACGGGCCAC GTCATCGAGG CTGTGACCGG CGCCAGCGCA TGGCATCTCG GCGTCGCGGA CGACCCCGAG CGATATGGCA ATTACATAGG TGTCGCACCC GGCAGCACGG TGATCGGCGT GAGCGGTATG CCCTGCGCCT ATTACGGCGC GACGCCGCTT CTGGTGACGG CACAGGGTGC TGCCTTCACG GGCGGAAAGC TCCGTCTTGC CATCCATTGC CTCGAACTGA CCGGGCCGGC CGCCTGA
|
Protein sequence | MSDSTHLGLP YLEAAQAQKH VTVNEALRRL DALVQLSIVS RSLATPPDAP EEGARYIVAP SPTDMWEGRA GKVAAFIDGA WVFFMPGDGW RAWDEEAGEL LVRSGGTWNT VGGAGGPTSA HGATTRMSIV EGDHVLAAGT ASTPDFMIPD RGIVLGVTGH VIEAVTGASA WHLGVADDPE RYGNYIGVAP GSTVIGVSGM PCAYYGATPL LVTAQGAAFT GGKLRLAIHC LELTGPAA
|
| |