Gene Plav_0919 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0919 
Symbol 
ID5454627 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp984931 
End bp988791 
Gene Length3861 bp 
Protein Length1286 aa 
Translation table11 
GC content68% 
IMG OID640876490 
Productgene transfer agent (GTA) like protein 
Protein accessionYP_001412199 
Protein GI154251375 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones55 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGACGA TCGTTCTATC GAGCGCGGGC TCCGCGCTTG GCAGCGCGTT GCTGCCCTCG 
GGCCTCAACT TTTTCGGCGC GACGATTTCA GGCGCGGCGA TCGGCAGCGC CATCGGCACG
ATGGCCGGCT CCTATGCGGA CGCACAGCTT TTCGGCAGCA GCACCTCGGC GGAAGGCCCG
CGCCTCAACG ATCTCCACGT CATGGCATCG ACCGAGGGAG CACCAATTCC GCGCGCCTAT
GGCCGCGCCA GGCTGGCAGG GCAGGTGATC TGGGCGACCA ATTACCGCGA GCGGACGCGC
AGGCGCTCTG CCGGCGGCGG CAAGGGCGGC GGCTCATCGG CAAGCGTCAC CGAATACAGC
TACAGCGTCT CCTTTGCCGT CGCGCTTTGC GAGGGCGAGG TGACGCGCAT CGGCCGCGTC
TGGGCGGATG GCAAGCCCTT GTCGCTCGCG AATGTCGCCT GGCGGCTCCA TGCGGGCGGC
GAGACGCAGG AATGCGACCC GCTGATCGAG GCGGTGGAAG GCGCGGCGCC CGCCTATCGC
GGCACCGCCT ATATCGTGTT CGAGGAGATG GATGTCACGC CGTTCGGCAA CCGCATTCCG
CAGCTGAGCT TCGAGGTGTT CCGCACGCTC GACCATGTGG AGGGGCTGGT GCGCGCGGTG
ACTGTGATCC CCGGCGCGGG CGAGTTCGTC TACGACACGG CGGCGCCGCG CGAAATATTC
AGCGAGACGT CGAGCCGCGC GATCAACATC CATACGTCGG ACGGCCGGGC AGACTTTTCC
GTGGCGATGG ACCAGATGGA AGCGGCGCTG CCGAACGCGA AGAGCGTTTC GCTCGTCGTC
TCATGGTTCG GCGACGATTT GCGCTGCGGT GAATGCAGCG TGCGGCCGAA GGTCGAGACG
GCCCACAAGA TAACGGCGCC GGGAAGCTGG AGCGTCGCCG GCCTCTCGCG CGCCGCGGCG
GGCGTCGTGA GCATGATGGA CGGAAGCCCG GCCTATGGCG GCACGCCATC CGACGCATCC
GTCACGCGCG CCCTACAAAA CCTGCGGGCG CGGGGGCTCG ATGTCGTCTT CTATCCCTTC
ATCATGATGG ACGTGGCGCC GGACAACACG CTCACCGATC CATGGACCGG AGCGGCGGGG
CAGCCCGCCT ATCCATGGCG CGGGCGCATC ACCTGCGCCC GCGACCTCGA CGGGACGGAC
GCGGCAGCGG CGCAGGTGGC AGCCTTCTTC GACGGCGGCG CATGGTCCTA CCGCCGCATG
GTGTTGCATT ATGCGGCGCT CTGCGCGGCA GCGGGCGGCG TCGAAGCATT TCTCATCGGT
TCGGAGTTGC GCGGGCTGAC GCAGATACGC GATGCGGCGG GCGACTATCC AGCCGTTGCG
GCACTGAAGA CGCTGGCGGC GGATGTGCGC GAGATCGTCG GGCCGGATAC GAAGATCTCC
TATGCCGCCG ACTGGTCCGA ATATCGCGGG CACGATGCGG GCGGCGGCGA GTTCATCTTC
CATCTCGACC CGCTCTGGGC CGATCCCGAG ATCGACTTCA TCGGCATCGA CAATTACGCG
CCGCTGACCG ACTGGCGCGA CGGCCACATG CATCGCGATG CCGAGGACGG CTGGACCTCG
ATCTACGACC TCGGCTATCT CCGCAGCCGC ATCGCGGGCG GCGAGGCGTT CGACTGGTAT
TATGCGAGCG AGGCGGACCG GGCGGCACAG ATACGCACGC CGATCACCGA CGGCGCCTAT
GGGAAGCCAT GGGTGTGGCG CGCGAAGGAC ATCAAGTCGT GGTGGACGAA TGCGCATTAC
GACCGGCCGG GCGGCGTGGA AGAGACGACG CCGACGGCAT GGGTGCCGCA ATCGAAGCCG
ATATGGCTGA CGGAGACGGG ATGCCCGGCG GTCGACAAGG GCACGAACGA GCCGAATGTC
TTTACCGACC CGAAATCGTC GGAGAGCGGG CTGCCGCATT TCTCGCACGG CACACGCGAC
GATTTCATCC AACGCCGCTT CATCGAGGCG CAAATGTCTT ATTGGGATCC GGCGCATGAC
GATCACAGCG CCGGCACGAA CCCGGTTTCC GGGATTTATG GTGGGCCGAT GGTCGATCCC
TCGCGCGTCT TTTTCTGGAC CTGGGATGCG CGTCCTTTTC CGGCCTTTCC CGAGCGGTAC
GATCTGTGGG CGGACGCCGA GAACTGGCAG CTCGGCCATT GGCTGAACGG ACGAATGGGC
GCGGCGCCAC TGGCGGCGCT TGCCAGTGCG ATCATGCATG ATGCGGGCTT CGATGCCTTC
GACGCCGGCG CGCTGACGGG CGTGGTGGAC GGTTTTGTCA TCGACAGGAT CATGTCGCCC
CGCGCGGCGC TCGAACCGCT GATGCTGGCC TGCTTTTTCG ACGCCGCGGA AAGCGAGGGC
ACCATCCGCC TGCGTCATTT TGGGGAAGCA CCGGCGACCG TGCTGACACC GGCGATGCTT
GCAGTGACTG AGGAGGCGGC GACGCCCGGC TACCGGCTGA CACGCGGGCA GGAGACGGAG
CTGCCGGTCT CCGCGAAGCT TCTCTATATC GAAGGCAATG GGGAATACCG GCAGGCGGCG
GTGGAAGCAC GCCGGCTGTC GGCGCGGAGC GAGCGCGTGT CGACGGCGGC GCTGCCGATG
GTGCTGGGAC AGGCAAGCGC GCAGGGCATC GCCGATGTCT GGCTGCAGAA AGCATGGAGC
GAGCGCGAGC GCGCGACGCT TTCGCTGCCG CCGAGCCTGA TCGCTCTCGA TCCGGGCGAC
ATGGTGGCGC TGGAGCTGCC GGAACGCACG GCGCATTACC GGCTGACCGC GGTGACGGAT
GCGGGCGCGC GGGAGGTGTC CGCCGTCGCG CATGAGGCGA GCCTGTTTGG CCGCGCGGCA
GCACCCGCGC GCAGAGCGGC ACCGAACGAC ATGCCGGTAT GGGGAACGCC GCTCGCGGTC
CTTATGGACC TGCCTCTGCT GGCGGAGACG GATACGCCGC ACACGCCGCG CATTGCCGTG
GCGGCCGATC CCTGGCCGGG CGGGATTGCC ATTTACAAAA GCGCCGGAGC GGGCTTTGCC
CTTGATCGTA TCGTGCGGCA TGCCGCCACA ATCGGCCGGA CGCAGACGGC GCTGATGCCG
GGCCCCGCGG GACGCTGGGA CATGGCGAAC AGCCTTGTCG TCCGGCTGGT GAGCGGCGAG
CTGGCAAGCG CGGAGGCGGC CGCCGTGCTG GCGGGGGCGA ACCTCGCCGC GCTCGAAACG
CCGGAGGGCG AATGGGAAGT CTTCCAGTTT TGCGAGGCGG AGCTTGTGGC CGAAGACACA
TATCGCCTCG CAGGCCTTCT GCGAGGTCAG GCGGGGACGG AGGGAGCAAT GCGGTCGCCG
CTCGAAGCGG GCGCGCGCTT CGTCGTTATG GATGGTGCGG TGAGCGAGCT GGGAATGGCG
GATGCCGAAC GCGGGCTGGC GCGCGAATGG GCATACGGCC CCGCGCCGCT CGCCTTCGAC
GATCCCTCCT ATGAGAGCAC CACGCGCGCG TTCGACGGCA TTGGCCTGCG CCCGCTGAGC
CCTGTTCACA TCCGGGCGCA TCGCGGCGCG GAGGGAGCGA TCGACATTCG CTGGACCCGC
CGAACGCGGA GCGGTGGCGA CAGCTGGGCC GGGCTCGACG TGCCGCTGGC CGAAGAGGTC
GAGGCCTATG AGGTGGAAAT CCGCGACGGC GAAACCGTGA AGCGTGTGAT TGCCGCATCG
GCGCCTCAGG CGAGCTACAG CGCCACGGCA CAGACGGCAG ATTTCGGCAG CGCGGATTTT
CCCAGTCTCG AAATCACCAT CCATCAGTTG AGCCGCGCTT TTGGACGCGG CGCGGGAAGG
AGCGTTCGCC TCGATGTCTG A
 
Protein sequence
MATIVLSSAG SALGSALLPS GLNFFGATIS GAAIGSAIGT MAGSYADAQL FGSSTSAEGP 
RLNDLHVMAS TEGAPIPRAY GRARLAGQVI WATNYRERTR RRSAGGGKGG GSSASVTEYS
YSVSFAVALC EGEVTRIGRV WADGKPLSLA NVAWRLHAGG ETQECDPLIE AVEGAAPAYR
GTAYIVFEEM DVTPFGNRIP QLSFEVFRTL DHVEGLVRAV TVIPGAGEFV YDTAAPREIF
SETSSRAINI HTSDGRADFS VAMDQMEAAL PNAKSVSLVV SWFGDDLRCG ECSVRPKVET
AHKITAPGSW SVAGLSRAAA GVVSMMDGSP AYGGTPSDAS VTRALQNLRA RGLDVVFYPF
IMMDVAPDNT LTDPWTGAAG QPAYPWRGRI TCARDLDGTD AAAAQVAAFF DGGAWSYRRM
VLHYAALCAA AGGVEAFLIG SELRGLTQIR DAAGDYPAVA ALKTLAADVR EIVGPDTKIS
YAADWSEYRG HDAGGGEFIF HLDPLWADPE IDFIGIDNYA PLTDWRDGHM HRDAEDGWTS
IYDLGYLRSR IAGGEAFDWY YASEADRAAQ IRTPITDGAY GKPWVWRAKD IKSWWTNAHY
DRPGGVEETT PTAWVPQSKP IWLTETGCPA VDKGTNEPNV FTDPKSSESG LPHFSHGTRD
DFIQRRFIEA QMSYWDPAHD DHSAGTNPVS GIYGGPMVDP SRVFFWTWDA RPFPAFPERY
DLWADAENWQ LGHWLNGRMG AAPLAALASA IMHDAGFDAF DAGALTGVVD GFVIDRIMSP
RAALEPLMLA CFFDAAESEG TIRLRHFGEA PATVLTPAML AVTEEAATPG YRLTRGQETE
LPVSAKLLYI EGNGEYRQAA VEARRLSARS ERVSTAALPM VLGQASAQGI ADVWLQKAWS
ERERATLSLP PSLIALDPGD MVALELPERT AHYRLTAVTD AGAREVSAVA HEASLFGRAA
APARRAAPND MPVWGTPLAV LMDLPLLAET DTPHTPRIAV AADPWPGGIA IYKSAGAGFA
LDRIVRHAAT IGRTQTALMP GPAGRWDMAN SLVVRLVSGE LASAEAAAVL AGANLAALET
PEGEWEVFQF CEAELVAEDT YRLAGLLRGQ AGTEGAMRSP LEAGARFVVM DGAVSELGMA
DAERGLAREW AYGPAPLAFD DPSYESTTRA FDGIGLRPLS PVHIRAHRGA EGAIDIRWTR
RTRSGGDSWA GLDVPLAEEV EAYEVEIRDG ETVKRVIAAS APQASYSATA QTADFGSADF
PSLEITIHQL SRAFGRGAGR SVRLDV