Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0919 |
Symbol | |
ID | 5454627 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 984931 |
End bp | 988791 |
Gene Length | 3861 bp |
Protein Length | 1286 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 640876490 |
Product | gene transfer agent (GTA) like protein |
Protein accession | YP_001412199 |
Protein GI | 154251375 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 55 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCGACGA TCGTTCTATC GAGCGCGGGC TCCGCGCTTG GCAGCGCGTT GCTGCCCTCG GGCCTCAACT TTTTCGGCGC GACGATTTCA GGCGCGGCGA TCGGCAGCGC CATCGGCACG ATGGCCGGCT CCTATGCGGA CGCACAGCTT TTCGGCAGCA GCACCTCGGC GGAAGGCCCG CGCCTCAACG ATCTCCACGT CATGGCATCG ACCGAGGGAG CACCAATTCC GCGCGCCTAT GGCCGCGCCA GGCTGGCAGG GCAGGTGATC TGGGCGACCA ATTACCGCGA GCGGACGCGC AGGCGCTCTG CCGGCGGCGG CAAGGGCGGC GGCTCATCGG CAAGCGTCAC CGAATACAGC TACAGCGTCT CCTTTGCCGT CGCGCTTTGC GAGGGCGAGG TGACGCGCAT CGGCCGCGTC TGGGCGGATG GCAAGCCCTT GTCGCTCGCG AATGTCGCCT GGCGGCTCCA TGCGGGCGGC GAGACGCAGG AATGCGACCC GCTGATCGAG GCGGTGGAAG GCGCGGCGCC CGCCTATCGC GGCACCGCCT ATATCGTGTT CGAGGAGATG GATGTCACGC CGTTCGGCAA CCGCATTCCG CAGCTGAGCT TCGAGGTGTT CCGCACGCTC GACCATGTGG AGGGGCTGGT GCGCGCGGTG ACTGTGATCC CCGGCGCGGG CGAGTTCGTC TACGACACGG CGGCGCCGCG CGAAATATTC AGCGAGACGT CGAGCCGCGC GATCAACATC CATACGTCGG ACGGCCGGGC AGACTTTTCC GTGGCGATGG ACCAGATGGA AGCGGCGCTG CCGAACGCGA AGAGCGTTTC GCTCGTCGTC TCATGGTTCG GCGACGATTT GCGCTGCGGT GAATGCAGCG TGCGGCCGAA GGTCGAGACG GCCCACAAGA TAACGGCGCC GGGAAGCTGG AGCGTCGCCG GCCTCTCGCG CGCCGCGGCG GGCGTCGTGA GCATGATGGA CGGAAGCCCG GCCTATGGCG GCACGCCATC CGACGCATCC GTCACGCGCG CCCTACAAAA CCTGCGGGCG CGGGGGCTCG ATGTCGTCTT CTATCCCTTC ATCATGATGG ACGTGGCGCC GGACAACACG CTCACCGATC CATGGACCGG AGCGGCGGGG CAGCCCGCCT ATCCATGGCG CGGGCGCATC ACCTGCGCCC GCGACCTCGA CGGGACGGAC GCGGCAGCGG CGCAGGTGGC AGCCTTCTTC GACGGCGGCG CATGGTCCTA CCGCCGCATG GTGTTGCATT ATGCGGCGCT CTGCGCGGCA GCGGGCGGCG TCGAAGCATT TCTCATCGGT TCGGAGTTGC GCGGGCTGAC GCAGATACGC GATGCGGCGG GCGACTATCC AGCCGTTGCG GCACTGAAGA CGCTGGCGGC GGATGTGCGC GAGATCGTCG GGCCGGATAC GAAGATCTCC TATGCCGCCG ACTGGTCCGA ATATCGCGGG CACGATGCGG GCGGCGGCGA GTTCATCTTC CATCTCGACC CGCTCTGGGC CGATCCCGAG ATCGACTTCA TCGGCATCGA CAATTACGCG CCGCTGACCG ACTGGCGCGA CGGCCACATG CATCGCGATG CCGAGGACGG CTGGACCTCG ATCTACGACC TCGGCTATCT CCGCAGCCGC ATCGCGGGCG GCGAGGCGTT CGACTGGTAT TATGCGAGCG AGGCGGACCG GGCGGCACAG ATACGCACGC CGATCACCGA CGGCGCCTAT GGGAAGCCAT GGGTGTGGCG CGCGAAGGAC ATCAAGTCGT GGTGGACGAA TGCGCATTAC GACCGGCCGG GCGGCGTGGA AGAGACGACG CCGACGGCAT GGGTGCCGCA ATCGAAGCCG ATATGGCTGA CGGAGACGGG ATGCCCGGCG GTCGACAAGG GCACGAACGA GCCGAATGTC TTTACCGACC CGAAATCGTC GGAGAGCGGG CTGCCGCATT TCTCGCACGG CACACGCGAC GATTTCATCC AACGCCGCTT CATCGAGGCG CAAATGTCTT ATTGGGATCC GGCGCATGAC GATCACAGCG CCGGCACGAA CCCGGTTTCC GGGATTTATG GTGGGCCGAT GGTCGATCCC TCGCGCGTCT TTTTCTGGAC CTGGGATGCG CGTCCTTTTC CGGCCTTTCC CGAGCGGTAC GATCTGTGGG CGGACGCCGA GAACTGGCAG CTCGGCCATT GGCTGAACGG ACGAATGGGC GCGGCGCCAC TGGCGGCGCT TGCCAGTGCG ATCATGCATG ATGCGGGCTT CGATGCCTTC GACGCCGGCG CGCTGACGGG CGTGGTGGAC GGTTTTGTCA TCGACAGGAT CATGTCGCCC CGCGCGGCGC TCGAACCGCT GATGCTGGCC TGCTTTTTCG ACGCCGCGGA AAGCGAGGGC ACCATCCGCC TGCGTCATTT TGGGGAAGCA CCGGCGACCG TGCTGACACC GGCGATGCTT GCAGTGACTG AGGAGGCGGC GACGCCCGGC TACCGGCTGA CACGCGGGCA GGAGACGGAG CTGCCGGTCT CCGCGAAGCT TCTCTATATC GAAGGCAATG GGGAATACCG GCAGGCGGCG GTGGAAGCAC GCCGGCTGTC GGCGCGGAGC GAGCGCGTGT CGACGGCGGC GCTGCCGATG GTGCTGGGAC AGGCAAGCGC GCAGGGCATC GCCGATGTCT GGCTGCAGAA AGCATGGAGC GAGCGCGAGC GCGCGACGCT TTCGCTGCCG CCGAGCCTGA TCGCTCTCGA TCCGGGCGAC ATGGTGGCGC TGGAGCTGCC GGAACGCACG GCGCATTACC GGCTGACCGC GGTGACGGAT GCGGGCGCGC GGGAGGTGTC CGCCGTCGCG CATGAGGCGA GCCTGTTTGG CCGCGCGGCA GCACCCGCGC GCAGAGCGGC ACCGAACGAC ATGCCGGTAT GGGGAACGCC GCTCGCGGTC CTTATGGACC TGCCTCTGCT GGCGGAGACG GATACGCCGC ACACGCCGCG CATTGCCGTG GCGGCCGATC CCTGGCCGGG CGGGATTGCC ATTTACAAAA GCGCCGGAGC GGGCTTTGCC CTTGATCGTA TCGTGCGGCA TGCCGCCACA ATCGGCCGGA CGCAGACGGC GCTGATGCCG GGCCCCGCGG GACGCTGGGA CATGGCGAAC AGCCTTGTCG TCCGGCTGGT GAGCGGCGAG CTGGCAAGCG CGGAGGCGGC CGCCGTGCTG GCGGGGGCGA ACCTCGCCGC GCTCGAAACG CCGGAGGGCG AATGGGAAGT CTTCCAGTTT TGCGAGGCGG AGCTTGTGGC CGAAGACACA TATCGCCTCG CAGGCCTTCT GCGAGGTCAG GCGGGGACGG AGGGAGCAAT GCGGTCGCCG CTCGAAGCGG GCGCGCGCTT CGTCGTTATG GATGGTGCGG TGAGCGAGCT GGGAATGGCG GATGCCGAAC GCGGGCTGGC GCGCGAATGG GCATACGGCC CCGCGCCGCT CGCCTTCGAC GATCCCTCCT ATGAGAGCAC CACGCGCGCG TTCGACGGCA TTGGCCTGCG CCCGCTGAGC CCTGTTCACA TCCGGGCGCA TCGCGGCGCG GAGGGAGCGA TCGACATTCG CTGGACCCGC CGAACGCGGA GCGGTGGCGA CAGCTGGGCC GGGCTCGACG TGCCGCTGGC CGAAGAGGTC GAGGCCTATG AGGTGGAAAT CCGCGACGGC GAAACCGTGA AGCGTGTGAT TGCCGCATCG GCGCCTCAGG CGAGCTACAG CGCCACGGCA CAGACGGCAG ATTTCGGCAG CGCGGATTTT CCCAGTCTCG AAATCACCAT CCATCAGTTG AGCCGCGCTT TTGGACGCGG CGCGGGAAGG AGCGTTCGCC TCGATGTCTG A
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Protein sequence | MATIVLSSAG SALGSALLPS GLNFFGATIS GAAIGSAIGT MAGSYADAQL FGSSTSAEGP RLNDLHVMAS TEGAPIPRAY GRARLAGQVI WATNYRERTR RRSAGGGKGG GSSASVTEYS YSVSFAVALC EGEVTRIGRV WADGKPLSLA NVAWRLHAGG ETQECDPLIE AVEGAAPAYR GTAYIVFEEM DVTPFGNRIP QLSFEVFRTL DHVEGLVRAV TVIPGAGEFV YDTAAPREIF SETSSRAINI HTSDGRADFS VAMDQMEAAL PNAKSVSLVV SWFGDDLRCG ECSVRPKVET AHKITAPGSW SVAGLSRAAA GVVSMMDGSP AYGGTPSDAS VTRALQNLRA RGLDVVFYPF IMMDVAPDNT LTDPWTGAAG QPAYPWRGRI TCARDLDGTD AAAAQVAAFF DGGAWSYRRM VLHYAALCAA AGGVEAFLIG SELRGLTQIR DAAGDYPAVA ALKTLAADVR EIVGPDTKIS YAADWSEYRG HDAGGGEFIF HLDPLWADPE IDFIGIDNYA PLTDWRDGHM HRDAEDGWTS IYDLGYLRSR IAGGEAFDWY YASEADRAAQ IRTPITDGAY GKPWVWRAKD IKSWWTNAHY DRPGGVEETT PTAWVPQSKP IWLTETGCPA VDKGTNEPNV FTDPKSSESG LPHFSHGTRD DFIQRRFIEA QMSYWDPAHD DHSAGTNPVS GIYGGPMVDP SRVFFWTWDA RPFPAFPERY DLWADAENWQ LGHWLNGRMG AAPLAALASA IMHDAGFDAF DAGALTGVVD GFVIDRIMSP RAALEPLMLA CFFDAAESEG TIRLRHFGEA PATVLTPAML AVTEEAATPG YRLTRGQETE LPVSAKLLYI EGNGEYRQAA VEARRLSARS ERVSTAALPM VLGQASAQGI ADVWLQKAWS ERERATLSLP PSLIALDPGD MVALELPERT AHYRLTAVTD AGAREVSAVA HEASLFGRAA APARRAAPND MPVWGTPLAV LMDLPLLAET DTPHTPRIAV AADPWPGGIA IYKSAGAGFA LDRIVRHAAT IGRTQTALMP GPAGRWDMAN SLVVRLVSGE LASAEAAAVL AGANLAALET PEGEWEVFQF CEAELVAEDT YRLAGLLRGQ AGTEGAMRSP LEAGARFVVM DGAVSELGMA DAERGLAREW AYGPAPLAFD DPSYESTTRA FDGIGLRPLS PVHIRAHRGA EGAIDIRWTR RTRSGGDSWA GLDVPLAEEV EAYEVEIRDG ETVKRVIAAS APQASYSATA QTADFGSADF PSLEITIHQL SRAFGRGAGR SVRLDV
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