| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0915 |
|---|
| Symbol | |
|---|
| ID | 5456294 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | + |
|---|
| Start bp | 982360 |
|---|
| End bp | 982977 |
|---|
| Gene Length | 618 bp |
|---|
| Protein Length | 205 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640876486 |
|---|
| Product | phage-related minor tail protein-like protein |
|---|
| Protein accession | YP_001412195 |
|---|
| Protein GI | 154251371 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG5281] Phage-related minor tail protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 55 |
|---|
| Fosmid unclonability p-value | 0.962484 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGAAG ACAACGATCC CGAAGCCCTC ACTCTCGCGA TGGAGGCGGC GGCGGAGGCG
ACGCGCGCTT TCGGACTGGA GACGCAGCGG ACGATGAAAG CCGTGACCGA GGATTTCCGG
CGCGCGGGCG CGGGCGGGCG CGACTTCGGC AGCGCGGTGG CCGGCGCCTT TGACGGCATT
GCGCTGAAGG GGCGGTCGCT TTCGGATGTG TTGCGGAAGC TGGCGCTCGA TCTGTCGCGC
ATGGCGCTTG AAAGTGCGGG CAATGCGATG GGGAGCGCGA TTTCCGGCGC GATGGGGAGC
CTGTTCGCCA GCGCGAAGGG CAATGCTTTC TCCGACGGGC GCGTGATGCC CTTCGCCAAG
GGTGGCGTGG TGTCGAGCCC GATGCTCTTT CCGCTGCGCG GCGGCACGGG GCTGGCGGGC
GAAGCGGGCG CGGAAGCGAT ATTGCCGTTG CGGCGCGGCG CGGACGGGCG GCTCGGCGTG
GCGGCGGAAG GCGGCGGGGG ACCGATGCAG ATCACCTTCA ATGTGACGGC GGCGGACGCC
GAGAGCTTCC GCCGTTCGGA ATCCCAGATT GCCGCGATGC TCGCGCGCGT GGCGGGACGT
GGCGCAAGGA ATCTTTAA
|
|---|
| Protein sequence | MTEDNDPEAL TLAMEAAAEA TRAFGLETQR TMKAVTEDFR RAGAGGRDFG SAVAGAFDGI
ALKGRSLSDV LRKLALDLSR MALESAGNAM GSAISGAMGS LFASAKGNAF SDGRVMPFAK
GGVVSSPMLF PLRGGTGLAG EAGAEAILPL RRGADGRLGV AAEGGGGPMQ ITFNVTAADA
ESFRRSESQI AAMLARVAGR GARNL
|
|---|
| |