| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0896 |
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| Symbol | |
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| ID | 5454749 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 963987 |
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| End bp | 965786 |
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| Gene Length | 1800 bp |
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| Protein Length | 599 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640876467 |
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| Product | ABC transporter related |
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| Protein accession | YP_001412176 |
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| Protein GI | 154251352 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0488] ATPase components of ABC transporters with duplicated ATPase domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 48 |
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| Fosmid unclonability p-value | 0.286143 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGCCGCAC CGCTTCTCGC TCTTCGGGAC ATTCGCGTCG CCTTCGCCGA TCAGGTCCTG
ATTGCGGGCG CGAGCTTCGC GCTCACGCCG GGCGACCACC TCTGCCTCGT CGGGCGAAAC
GGCAGCGGCA AGTCAACGCT CCTGCGTATC GCGGCGGGGC TTGTCGACGC GGATGGGGGC
GAGATATTCC GCCAGCCGGG AACCCGGATT GCCTATCTCG AACAGATGCC GGATTTCGGC
GGCGCCAAAA CCGTCATGGA CTATGCGACG GCGGGCGGGG CCGAGGCGCA CAAGGCCGCC
GCCGCGCTTG ACGAATTGAG GCTTTCGCCG AGCGCCGATC CGTCGACGCT CTCCGGCGGC
GAGGGCCGCA AGGCGGCGCT TGCCCGCGTA CTGGCGGAGG AGCCCGACAT TCTCCTTCTC
GACGAGCCGA CCAACCATCT CGATCTTCCT TCCATCGAAT GGCTGGAAGA AAAGCTGTCG
CAGTTTCGCG GCGCTTTCGT TCTCATCAGC CATGACAGAG CGTTTCTGCG CAGGCTCGCG
GCCGGCTGCC TGTGGTTGGA CCGGGGCGCG ATCCGCCGCC TCGACAAGGG CTTCGCCGAG
TTCGACGCCT GGTCGGAGCA GATCCTCGCC GAGGAAGAGG TCACCGCGCG CAAGCTCGAT
CGCCTGATCG AGCAGGAAAC GCAGTGGTCG CGCGAAGGCA TCTCCGCCCG GCGCACGCGC
AATCAGGGCC GCCTGCGCCG GCTGCATTCG CTGCGTGCCG AGCGCGCCGG CCAGATCGGA
CAAACCGGCC GCATCGATCT CGTCGCCGAA AGCGGGCAGG CATCCGGCTC GCTCGTCGTC
GAGGCAAAGA ACGTCACCAA GATCTGGCCG CAGCCGGATG GCAGCGAGCG CGTCGCCATT
CGCGATTTCT CGACGCGGAT CATGCGTGGC GACAAGGTCG GACTGATCGG CCCCAATGGC
GCGGGCAAGA CGACTTTGCT CAAGATTCTC ACTGGTACGC TCGCGCCCGA TAGCGGCAGC
GTGCGGCTCG GCACGAACCT CACGCCCGTC TATGTCGATC AGTCGCGCTC CTCCCTCGAT
CCCGAGGCGA CGCTCTGGCA GACCCTGTGC GAAGGCGGCG GCGACCAGGT GCTGGTGCGC
GGCCAGCCGC GCCATGTCGT TTCCTACCTG AAGGATTTTC TGTTCCGCGA GTCGCAGGCG
CGCCAGCCGG TGAAGGCGCT GTCCGGCGGC GAACAGTGCC GGCTGCTCCT CGCCCGCGCC
CTCGCCAAGC CGTCGAACCT CCTGATCCTC GACGAGCCGA CAAATGACCT CGACATGGAC
ACGCTCGACC TCCTGCAGGA GGTGCTCGCG GACTATGACG GCACCGTCCT TCTGGTCAGC
CATGACCGCG ACTTTCTCGA CCGCGTCGTC ACTTCCGTTG TCGCGCTCGA CGGCGAGGGG
AATGCCTCAG AGTATCCCGG CGGTTATTCC GACTATCTGA GGCAGCGCAG GCAAGCTGCT
GCGACCGCGA CGCGCGGCGC GTCTTCCTCC GCGCCCAAGG CAGAGCGTTC CCGCGCGCCG
ACCAAACTCT CCTACAAGGA AGTGCGCGCG CTGGAGGAGC TTCAGACGCG GATGCCGGAA
CTTGCGCGCG AAATCGAGAA CGTCGAGAAA AAGCTCGCCG ATCCCGATCT TTATGCGCGC
GATCCCGAGC TCTTCCACAA GACGATGACA CGCCACGACG CGTTGAAGGC GGAGCTTGCC
TCCGCGGAAG AGCACTGGCT GGAACTCGAG ATGAAGCGTG AGGAATTGTC GGGTGGCTAG
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| Protein sequence | MAAPLLALRD IRVAFADQVL IAGASFALTP GDHLCLVGRN GSGKSTLLRI AAGLVDADGG
EIFRQPGTRI AYLEQMPDFG GAKTVMDYAT AGGAEAHKAA AALDELRLSP SADPSTLSGG
EGRKAALARV LAEEPDILLL DEPTNHLDLP SIEWLEEKLS QFRGAFVLIS HDRAFLRRLA
AGCLWLDRGA IRRLDKGFAE FDAWSEQILA EEEVTARKLD RLIEQETQWS REGISARRTR
NQGRLRRLHS LRAERAGQIG QTGRIDLVAE SGQASGSLVV EAKNVTKIWP QPDGSERVAI
RDFSTRIMRG DKVGLIGPNG AGKTTLLKIL TGTLAPDSGS VRLGTNLTPV YVDQSRSSLD
PEATLWQTLC EGGGDQVLVR GQPRHVVSYL KDFLFRESQA RQPVKALSGG EQCRLLLARA
LAKPSNLLIL DEPTNDLDMD TLDLLQEVLA DYDGTVLLVS HDRDFLDRVV TSVVALDGEG
NASEYPGGYS DYLRQRRQAA ATATRGASSS APKAERSRAP TKLSYKEVRA LEELQTRMPE
LAREIENVEK KLADPDLYAR DPELFHKTMT RHDALKAELA SAEEHWLELE MKREELSGG
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