| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0889 |
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| Symbol | |
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| ID | 5453887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 957799 |
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| End bp | 959457 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876460 |
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| Product | sulfite reductase (ferredoxin) |
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| Protein accession | YP_001412169 |
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| Protein GI | 154251345 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 43 |
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| Fosmid unclonability p-value | 0.0812727 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGTT ACGATGAATT CGACCAGCAG CTTGTGAACG AGCGCGTCGC GCAGTTCAGC
GGCCAGGTGG CGCGCCGCCT GTCCGGCGAA CTCACTGAAG ACGAGTTCAA GCAGCTCCGG
CTGATGAACG GCGTCTATCT CCAGCTTCAT GCCTACATGC TGCGGATCGC GGTGCCTTAC
GGCACGCTGT CGTCGAAGCA GCTTCGCATG CTCGCGCATA TCGGCCGCAA ATATGACCGC
GGCTACGGTC ACTTTACGAC ACGCCAGAAC CTTCAGTTCA ACTGGCCGGC GTTGAAAGAC
GTGCCGGACA TCCTGCGCGA TCTTGCCTCC GTCGAGATGC ACTGCATTCA GACCTCGGGC
AATTGCATCC GCAACGTGAC GTCGGACCAG TATGCGGGCG CGGCCAAGGA AGAGCTGGAA
GATCCCCGCA TCGTTTCGGA AATCATCCGT CAGTGGTCGA CCTTCCATCC GGAATTCTCG
TTCCTCCCGC GCAAGTTCAA GATCGCCGTT TCCGGCACGC CGGACGACCG CGCCGCAATC
CGCGTCCATG ACATCGGCAT CCAGATCGTC AAGAACGGCA AGGATGAGAT CGGGTACGAG
ATTTTCGTCG GTGGCGGTCT CGGCCGCACG CCGATGGTGG GCAAGAAGAT CGCGGATTTC
GTTCCGAAGG AAGACCTGCT CGCCTATCTC GAAGCGATCC TGCGCGTCTA CAACATGTAT
GGCCGCCGCG ACAATATCTA CAAGGCGCGC ATCAAGATCC TCGTGCATGA GATTGGCGCG
GACGAAATGA AGCGGCAGGT CGATGCCGAG TTTGCCGAAA TCCGCAAGGC CGGCGCCCTT
CATCTGCCGC AGGAAGAAGT TGCGCGGATC GAAGCCTATT TCCGCGCGCC GGATTTCGAG
ACGCTGCCGG ATGAAAGCAC CGAACTCAAC AAGGCTGTCG TTGCCGATCC TGCCTTCGCC
AACTGGGTAA AGTCGAACGT CGCGGCGCAC AGAGTGCCGG GCTATGCCAT CGTCAACATC
TCGCTGAAGC CCATCGGCGG CACGCCGGGC GATTGCTCGT CGGATCAGAT GGATGCAGTC
GCGGACATTG CGGAGAAGTA CAGCTTCGAT GAATTGCGCG TCACGCATGA GCAGAACCTG
ACGCTCGCGC ATGTCCGCAA GAAGGATCTC CACGCGGTCT ACCAGGCGCT GAAGCCACAT
GATCTGGCGA CGGCGAACAT CAATCTCATC ACCGACCAGA TTGCCTGCCC CGGTCTCGAT
TATTGCGCGC TGGCCAATGC ACGCTCCATC CCGATCGCTC AGCGCATCTC CGAACGTTTT
GCCGACATCG AGCGGCAGCA CGATATCGGC GAGCTGAAGA TCAACACGTC GGGCTGCATC
AATGCCTGCG GCCATCACCA TGTCGGCCAT ATCGGCATTC TCGGCGTCGA CAAGAAGGGC
GTCGAATATT ACCAGGTGAC GCTGGGCGGC GCGGCGGATG AGAAGACCGC CGTCGGCGAC
ATCGTCGGCC CTGCCTTTAC CGAAGAGCAG ATCGTCGATG CCATCGAGAC GATCGTCACC
ACCTATCTCG GCACGCGCCA GCCGGGCGAA CGGTTCATCG ACACCTATCG CCGCGTCGGC
ATCGACCCGT TCAAGGAGAG CCTCTATGCA ACTCATTAG
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| Protein sequence | MYRYDEFDQQ LVNERVAQFS GQVARRLSGE LTEDEFKQLR LMNGVYLQLH AYMLRIAVPY
GTLSSKQLRM LAHIGRKYDR GYGHFTTRQN LQFNWPALKD VPDILRDLAS VEMHCIQTSG
NCIRNVTSDQ YAGAAKEELE DPRIVSEIIR QWSTFHPEFS FLPRKFKIAV SGTPDDRAAI
RVHDIGIQIV KNGKDEIGYE IFVGGGLGRT PMVGKKIADF VPKEDLLAYL EAILRVYNMY
GRRDNIYKAR IKILVHEIGA DEMKRQVDAE FAEIRKAGAL HLPQEEVARI EAYFRAPDFE
TLPDESTELN KAVVADPAFA NWVKSNVAAH RVPGYAIVNI SLKPIGGTPG DCSSDQMDAV
ADIAEKYSFD ELRVTHEQNL TLAHVRKKDL HAVYQALKPH DLATANINLI TDQIACPGLD
YCALANARSI PIAQRISERF ADIERQHDIG ELKINTSGCI NACGHHHVGH IGILGVDKKG
VEYYQVTLGG AADEKTAVGD IVGPAFTEEQ IVDAIETIVT TYLGTRQPGE RFIDTYRRVG
IDPFKESLYA TH
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