| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0886 |
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| Symbol | |
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| ID | 5453598 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 955326 |
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| End bp | 956645 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 640876457 |
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| Product | FAD dependent oxidoreductase |
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| Protein accession | YP_001412166 |
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| Protein GI | 154251342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0665] Glycine/D-amino acid oxidases (deaminating) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.204512 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTTTTCCG TGCAGCCTCC CCAGCAAGTC ATCGTCATCG GCGCCGGCAT TGTCGGGGTG
TCGACCGCCT ACGAACTGGC GTTGCGCGGC GTGGGCGTGA CGCTGATCGA CATGCGCGAG
GGCGCGGGGC TCGGCACCAG CTTTGCGAAT GGCGGCCAGC TTTCGGCCTG TGAAGTGGCG
CCATGGGCGG GGCCGGAAAT TCCCGGCCTC ATTCTCAAAT GGCTCGGGCG GGACGACGCG
CCATTTCGCC TGCGGCCGAA AATGGACCCC GACCAGTGGC TCTGGCTGAT GCGATTTCTC
GCGCGCTGCC GCAGCTCCGC GCGGCGCGAA CGCATTCCCC ACAATCTCGA GCTTGCCTTG
CTGACGCGGG CGCGGCTCGC CGCTTACCGG GAGCAGTTCG CGGCGGCGGG CGAGGCGCTC
GAATTCGAGC AGCGCGAGAA AGGCATTCTC CGTATCTTCC GCGACCGGCA TTCGCTTGCC
GACGCGGTGG AGGAGACGAA GCTGATGGCG CGGCTCGGCG TCGAGCAGGA ACCGCTGACG
CCCGCGCAAT GCATCGACAT CGAACCGGCG CTCGGCCCGG CGATGCAGCG CGGCGACATT
GCGGGTGGTC TCTATTCGCG GACGGACAGC AGCGGCGACG CGCATCTCTA TTCGGTTGCG
CTGGCGGCGG CGGCGCAGCG GCTCGGCGTG CGCTTCATGA AGACGAGCCG GGCCGACAGC
ATTCTCACCG ACGGCGGGTG GGCGCGCGGC GTCACGACGG CGGAGGGCGA GGTCGAGGGC
GACGCGGTGG TGGTGGCGGC GGGAGCGGGC AGCGCGGCGC TGCTGAAGCC GCTGGGGCTT
CGCTCCTATA TCTATCCGCT GAAGGGCTAT TCGGTGACGC TGCCGGCCCC GGCAGGCAAT
GCGCCCGAGG TGAGCATCAC CGATGAGGAA CGCAAGATCG TCATCAGCCG TCTCGGCAAC
CGGCTGCGGG CAGCGGGGCA GGCCGAGGTC GGCGGCTACG ACCTGACGCT GGAGCGGCCA
CGCGCCGAAG CGGTGCTCTC GGCGCTGGTG AGCCTGTTTC CCCAGGCCGG GCCGGAACGG
GAGGCGGCGG AGTTCTGGTG CGGCTTGCGG CCGATGACGC CGGATGGCAG CCCGGTGATC
GGGGCGACAC CCGGCTTTGC CAACATTTTC ATCAATAGCG GCCACGGAAC GCTGGGCTGG
ACGCTGGGCG CCGGAAGCGG TGCGGCGCTG GCGGAGCTGA TCTGCGGCGG TGCGTCGCAA
CCAGACCTAA GTCCTTTTTC CATAAGAAGA TTCCAAGGTT TCACCGGCAT TTCAGGGTGA
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| Protein sequence | MFSVQPPQQV IVIGAGIVGV STAYELALRG VGVTLIDMRE GAGLGTSFAN GGQLSACEVA
PWAGPEIPGL ILKWLGRDDA PFRLRPKMDP DQWLWLMRFL ARCRSSARRE RIPHNLELAL
LTRARLAAYR EQFAAAGEAL EFEQREKGIL RIFRDRHSLA DAVEETKLMA RLGVEQEPLT
PAQCIDIEPA LGPAMQRGDI AGGLYSRTDS SGDAHLYSVA LAAAAQRLGV RFMKTSRADS
ILTDGGWARG VTTAEGEVEG DAVVVAAGAG SAALLKPLGL RSYIYPLKGY SVTLPAPAGN
APEVSITDEE RKIVISRLGN RLRAAGQAEV GGYDLTLERP RAEAVLSALV SLFPQAGPER
EAAEFWCGLR PMTPDGSPVI GATPGFANIF INSGHGTLGW TLGAGSGAAL AELICGGASQ
PDLSPFSIRR FQGFTGISG
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