| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0848 |
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| Symbol | |
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| ID | 5454428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 920150 |
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| End bp | 921703 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876419 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001412128 |
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| Protein GI | 154251304 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCTT CTATCCACGC GCAGACCATG CCGGACAAGC CTGCCTATAT CATGGCGGCG
ACCGGCGAGA CCGTGACCTT CAAAGAGCTG GACGAACGCT CCAACCAGGT GGCGCATCTG
TTCCGGGACG CAGGGCTGAA GCCGGGCGAC GCCATTGCGA TCTTCATGGA CAACAATGTC
CGCTATTATG AAATCTGCTG GGCGGCGCAG CGCGCGGGGC TCTATTTCAC CTGCATCTCG
TCGCGGCTGA CGGCGGGCGA GATTGCCTAT ATCGCGGAAG ATTGCGGGGC GAAGCTTTTC
TTCACATCGA CGGCGCTTGC CGCGACGGCG GAAGAACTGG TGAAAGACAA CCACCTGCCG
AAGGTCGCCC GCAAATTCGT CGTGGGCGGC GCGCTCAACG GCTATGAAAG CTATGAGGCA
GCGCGGGACA AATTCCCGAA GACGCGGATC GCCGATGAAA CGGCGGGCAC CGACATGCTC
TATTCGTCCG GCACCACGGG ACGGCCGAAA GGCGTCAAGC ATCCGCTGAC GGGCGGCGCC
ATCGACGAGG TGAGCGCGCT GGCGGGCCTT GCGATGCTGC TCTATGGCAT GGACGAGAAG
ACGATCTATC TTTCGCCCGC GCCGCTCTAT CACGCCGCGC CGCTCCGCTG GTCGATGACG
GTGCAGCGCC TCGGCGGCAC GGTGGTCGTG ATGGAACATT TCGACGCCGA AGACAGCCTG
CGCTGCATCG AGAAATACAA GGCGACGCAC AGCCAGTGGG TGCCGACGAT GTTTGTGCGG
ATGCTGAAGA TGCCGGAAGA CGTGCGCAAG AAATACGACG TCTCGTCGAT GAAGGTCGCG
ATCCACGCCG CCGCGCCCTG CCCCATCCCC GTGAAGGAGC AGATGATCGA ATGGTGGGGG
CCCGTTATCT ATGAATATTA CGCGGGCTCG GAAGGCAACG GCTTCACGGC GCTGAACTCG
GAAGAGTGGC TGGCGCACAA GGGCTCCGTC GGCAAGCCGC TCAACGCCAT TGCGCATATT
TGCGACGATG AAGGCAATGA ACTGCCGGTC GGCGAAGCGG GCACGATCTA TTTCGAGAGC
GACAGCCAGT TCGAATATCA CAACGACCCG AAGAAGACGC AGGAGTCGCG GCATCCGAAC
CATCCGACAT GGTCGACGCT CGGCGATATC GGCAAGGTGG ACGAGGAAGG CTATCTCTAC
CTCACCGACC GCAAGGCCTT CATGATCATT TCGGGCGGCG TGAACATCTA TCCGCAGGAA
GCAGAGAACA TTCTCGTCAT GCATCCGAAG GTTGCGGACG TCGCGGTGAT CGGCGTGCCG
AACGAGGATT TCGGCGAGGA GGTGAAGGCG ATCGTGCAGC CGGCCGACTG GTCGGAAGCA
GGCCCGGCGC TCGAGGCGGA GCTGATGGAG TTCTGCAAGA AGAACCTGTC GGCGATCAAA
TGCCCGCGCT CGATCGACTT CCAGGAGGAG CTGCCGCGGC ATCCGACGGG CAAGCTCTAC
AAGCGGCTCA TCCGCGACCG CTACTGGGGC AACCGGGACA GCAAGATCGT TTGA
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| Protein sequence | MHPSIHAQTM PDKPAYIMAA TGETVTFKEL DERSNQVAHL FRDAGLKPGD AIAIFMDNNV
RYYEICWAAQ RAGLYFTCIS SRLTAGEIAY IAEDCGAKLF FTSTALAATA EELVKDNHLP
KVARKFVVGG ALNGYESYEA ARDKFPKTRI ADETAGTDML YSSGTTGRPK GVKHPLTGGA
IDEVSALAGL AMLLYGMDEK TIYLSPAPLY HAAPLRWSMT VQRLGGTVVV MEHFDAEDSL
RCIEKYKATH SQWVPTMFVR MLKMPEDVRK KYDVSSMKVA IHAAAPCPIP VKEQMIEWWG
PVIYEYYAGS EGNGFTALNS EEWLAHKGSV GKPLNAIAHI CDDEGNELPV GEAGTIYFES
DSQFEYHNDP KKTQESRHPN HPTWSTLGDI GKVDEEGYLY LTDRKAFMII SGGVNIYPQE
AENILVMHPK VADVAVIGVP NEDFGEEVKA IVQPADWSEA GPALEAELME FCKKNLSAIK
CPRSIDFQEE LPRHPTGKLY KRLIRDRYWG NRDSKIV
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