Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0840 |
Symbol | |
ID | 5456105 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 912650 |
End bp | 913195 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640876411 |
Product | integral membrane protein-like protein |
Protein accession | YP_001412120 |
Protein GI | 154251296 |
COG category | [S] Function unknown |
COG ID | [COG5436] Predicted integral membrane protein |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 59 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCGCA AACCTCAGTG GCTCGCCGTT GTCGCGGTTC TTGCCGTCAT CTTGCATCTC GCCATCGTCT GGGCGGTCCC GCGCGTCGTC ATGTCGGTTG CGATGGCCAA AATCGGCGAT ACCGCGGCGC TCAACGAATT TACGCATCCG CCCCGCGCGA CCGATGCATC GCGTGCCGTC GTGCGGCCGA GTCCGGATCT CGCCTATTCG ATCTGCCTTC TCGACCTGTC GCAGGGTCCG GTTCGCATCG AGGTGCCGGC CAGCGCGCCC TACACCTCGC TCGCGCTCTA TTCCTCGATC ACGGATAATT ATTTCGTCCG CAACAACCGC GAAGATGGCG GACTTCAGGA TGGCGAAATG ATTGGTGTCG TCGTCACCGG TCCCGCTGAC GAGGCGCCAG CGAACCTGCC GGAAGGTCTC GCCGTCGTCA GCTCGCCGAC GGAAAAGGGC CTCGCTCTTG TCCGCCGCGT CATCGAGAGC GACGCCGCCA TGCCGGGGCT CGACGCGCTG CGCGCATCCT CGGTTTGCAC ACCATACGGA AACTGA
|
Protein sequence | MNRKPQWLAV VAVLAVILHL AIVWAVPRVV MSVAMAKIGD TAALNEFTHP PRATDASRAV VRPSPDLAYS ICLLDLSQGP VRIEVPASAP YTSLALYSSI TDNYFVRNNR EDGGLQDGEM IGVVVTGPAD EAPANLPEGL AVVSSPTEKG LALVRRVIES DAAMPGLDAL RASSVCTPYG N
|
| |