Gene Plav_0840 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0840 
Symbol 
ID5456105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp912650 
End bp913195 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content64% 
IMG OID640876411 
Productintegral membrane protein-like protein 
Protein accessionYP_001412120 
Protein GI154251296 
COG category[S] Function unknown 
COG ID[COG5436] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones59 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCGCA AACCTCAGTG GCTCGCCGTT GTCGCGGTTC TTGCCGTCAT CTTGCATCTC 
GCCATCGTCT GGGCGGTCCC GCGCGTCGTC ATGTCGGTTG CGATGGCCAA AATCGGCGAT
ACCGCGGCGC TCAACGAATT TACGCATCCG CCCCGCGCGA CCGATGCATC GCGTGCCGTC
GTGCGGCCGA GTCCGGATCT CGCCTATTCG ATCTGCCTTC TCGACCTGTC GCAGGGTCCG
GTTCGCATCG AGGTGCCGGC CAGCGCGCCC TACACCTCGC TCGCGCTCTA TTCCTCGATC
ACGGATAATT ATTTCGTCCG CAACAACCGC GAAGATGGCG GACTTCAGGA TGGCGAAATG
ATTGGTGTCG TCGTCACCGG TCCCGCTGAC GAGGCGCCAG CGAACCTGCC GGAAGGTCTC
GCCGTCGTCA GCTCGCCGAC GGAAAAGGGC CTCGCTCTTG TCCGCCGCGT CATCGAGAGC
GACGCCGCCA TGCCGGGGCT CGACGCGCTG CGCGCATCCT CGGTTTGCAC ACCATACGGA
AACTGA
 
Protein sequence
MNRKPQWLAV VAVLAVILHL AIVWAVPRVV MSVAMAKIGD TAALNEFTHP PRATDASRAV 
VRPSPDLAYS ICLLDLSQGP VRIEVPASAP YTSLALYSSI TDNYFVRNNR EDGGLQDGEM
IGVVVTGPAD EAPANLPEGL AVVSSPTEKG LALVRRVIES DAAMPGLDAL RASSVCTPYG
N