| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0838 |
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| Symbol | |
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| ID | 5455095 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 911200 |
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| End bp | 912057 |
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| Gene Length | 858 bp |
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| Protein Length | 285 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876409 |
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| Product | taurine dioxygenase |
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| Protein accession | YP_001412118 |
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| Protein GI | 154251294 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 0.518318 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 61 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAGG CCGCCAAGGC GCCACAACCG GCGCCCTTCA CCCTTTCGCC GCTGACGCCC
CTCATCGGCG CCGAGATAAC CGGCATCGAC CTCGTAAAAC CGCTCGACAC CGCCGCGCTT
TCCGCGCTGC GTCAGGCGCT GCTCGACTGG AAGGTCATCT TCTTCCGCGA TCAGGACATC
ACGACGGATC AGCACCTCGC CTTCGCGCGC CTCTTCGGCG AACTCGAAGT GCATCCCTTC
GCACCCCACA AGCAAGGCTA TCCCGAAGTC CTCGCCATCA CGCATGACCG CGACCGCCCG
GGCCGCGAGA ACAAATGGCA CAGCGACGTC ACATGGCGCG AATGCCCCTC GCTCGGCTCC
GTCCTCCGCG CCATCGAAGT GCCCGAGGTC GGCGGCGACA CGCTCTTCGC CGACATGTAT
GCGGCCTATG ACGGCCTCAC CGAAGAAGTG AAGGAAAAGA TCGACGGTGC CGTCGCCATC
CACGATTTCG CGCATTTCCG CGCTGCCATG CGCGCGCGCG GCAAGAGCGA AGCCGAGATC
GAGGAAATGA ACCGCAAATA TCCGATGGTC GAGCATCCGG TCGTCCGCAC CCATCCGGAA
ACCGGCCGCA AGGGCATCTA TGTGAACGTC GCCTTCACCC AGCATATCGT CGGCTTGGAA
AAGGCGGAGT CGGATGCGCT CCTGAAGCAT CTCTACGCGC AGGCCGCGAT CCCCGAATAT
CAGTGCCGCT TTCGCTGGCA GAAAAACTCC ATCGCCTTCT GGGACAATCG TTCGAGCCAG
CACTACGCCG CTTCGGATTA CTGGCCGGCC ACCCGTCGCA TGGAGCGCGT CACCATAATC
GGCGACCGTC CGCGCTAA
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| Protein sequence | MSQAAKAPQP APFTLSPLTP LIGAEITGID LVKPLDTAAL SALRQALLDW KVIFFRDQDI
TTDQHLAFAR LFGELEVHPF APHKQGYPEV LAITHDRDRP GRENKWHSDV TWRECPSLGS
VLRAIEVPEV GGDTLFADMY AAYDGLTEEV KEKIDGAVAI HDFAHFRAAM RARGKSEAEI
EEMNRKYPMV EHPVVRTHPE TGRKGIYVNV AFTQHIVGLE KAESDALLKH LYAQAAIPEY
QCRFRWQKNS IAFWDNRSSQ HYAASDYWPA TRRMERVTII GDRPR
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