Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0831 |
Symbol | |
ID | 5455808 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 903156 |
End bp | 904493 |
Gene Length | 1338 bp |
Protein Length | 445 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640876402 |
Product | beta-lactamase |
Protein accession | YP_001412111 |
Protein GI | 154251287 |
COG category | [V] Defense mechanisms |
COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.23283 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 52 |
Fosmid unclonability p-value | 0.655791 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCCGCGCG GGCCCGGAGC GCCGACGAGC TTTTTCGCGC GCTCGCCGCG TCCGAACAGA ATTGATCTTC AAAAACACTA TCCGGAGGAA TTCGTCATGA ACATCATACC CCGCGTCGGC AAACCCGAGG ATTCCGGTTT CGACCCCGCG CGGCTCGCCA ACATCACGAA TTATTTCCGG TCCTATGTCG ACCGGGAGAA GATTGCGGGC TTTTCCACGC TGGTTTCGCG CGGCGGCGAA ATCGCGCATT TCGAAACGGC GGGACATCGC GACCGCGAGC GCGGGCTGCC GATGGAAAAG GACACGATCT TCCGTATCTA TTCGATGACG AAGCCGATCA CGAGCCTTGC GCTGATGATG CTTTACGAGG AAGGGCACTT CCAGCTCAAC CACGCGGTGT CGCGCTATAT CCCTTCGTTC AAGAAGCTGC GCGTCTGGGC GAGCGGCACG GCGGAGAAAT ACGAGACGAA GCCCTGCGAA CGGGAAATGA CGATCCGCGA CCTGCTCACG CATACGTCGG GGCTGACCTA TGGCTTCATG TATGAGCATC CGGTGGACCA GCTTTACCGG GATGCCGGCA TCGAGGGCGC GAATACGGTC GGCATGACGC TGAAGGAAAT GGTCGAGGCC GTTTCCGAGA TTCCGCTGCT GTTCTCGCCG GGCGAACACT GGAATTATTC GGTTTCGACG GATGTGTGCG GGCATCTGGT GGAAGTGATG TCGGGGCGGC CGCTCGACGA GTTTCTCACC TCGCGCATCT TCGCGCCGCT CGGCATGGTG GATACGGCGT TCTTCGTACC GAAGGAAAAG CTCGGGCGCT TCGCGACCAA TTATTTCAAG AACCCGAAGA CGGGCAAGTC CGGCATCATG GATGTCGGCG ACGAGACGAG CACCTATGCG CAGCCGCCGA AGTTTCTCTC CGGTGGCGGC GGACTTACCT CGACGATGAT GGACTACTGG CGCTTCTGCC AGATGCTGCT GAATGGCGGC GAACTGGACG GAGTGCGCAT CTGTTCGCCG AAGACCATCG AGTTCATGAC GCTGAACCAT CTGCCGCGCG GCAAGGAAAT GAAGGAAATG TCGATTTCCG CCTTCAGCGA ACTGGCGGCG GAAGGCGCGG GCTTCGGGCT CGGCTTCCAG GTGGTTCTGG ATCCGGCGGT GACGCAGGCC ATCGGCTCGG CGGGGAATTT TTCGTGGGGC GGCGCTGCTT CCACCTATTT CTGGATCGAC CCGGAAGAAG ACCTGATCGC CATTCTGATG ACGCAGCTCT ATCCCTCCTC CACCTATCCG CTAAGGCCGC AGCTTCAACA GCTCGTCTAC GGCGCCATCA TCGATTGA
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Protein sequence | MPRGPGAPTS FFARSPRPNR IDLQKHYPEE FVMNIIPRVG KPEDSGFDPA RLANITNYFR SYVDREKIAG FSTLVSRGGE IAHFETAGHR DRERGLPMEK DTIFRIYSMT KPITSLALMM LYEEGHFQLN HAVSRYIPSF KKLRVWASGT AEKYETKPCE REMTIRDLLT HTSGLTYGFM YEHPVDQLYR DAGIEGANTV GMTLKEMVEA VSEIPLLFSP GEHWNYSVST DVCGHLVEVM SGRPLDEFLT SRIFAPLGMV DTAFFVPKEK LGRFATNYFK NPKTGKSGIM DVGDETSTYA QPPKFLSGGG GLTSTMMDYW RFCQMLLNGG ELDGVRICSP KTIEFMTLNH LPRGKEMKEM SISAFSELAA EGAGFGLGFQ VVLDPAVTQA IGSAGNFSWG GAASTYFWID PEEDLIAILM TQLYPSSTYP LRPQLQQLVY GAIID
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