| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0828 |
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| Symbol | |
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| ID | 5455401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 900042 |
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| End bp | 900872 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640876399 |
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| Product | taurine dioxygenase |
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| Protein accession | YP_001412108 |
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| Protein GI | 154251284 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG2175] Probable taurine catabolism dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.297497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 53 |
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| Fosmid unclonability p-value | 0.696924 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCGA TCGAAGTTCG GAAAATGACG GGCGGCTGTG GCGCCGAAGT GCTCGGCGCC
GATCTGGCGA AGCTGAGCAA TTCGGACATG GAGGCCGTGC GGCAGGCCTA TGTCGACTAC
GGCGTCGTCT TCTTCCGCGA CCAGAACCTC ACGCCCGAGG ACCACATCGC CTTCGCACGC
CGCTGGGGCG ACATCGTCGT CAACAGGTTC TTCACGCCGA CTCAAAATCC GCTCATCGCC
GAGGTGCGGA AGGAGAAGGA GCAGACCGTC AATATCGGTG GCGGCTGGCA CACGGATCAT
TCCTACGACG CCGAACCCGC CATGGGCTCC GTGCTCGTCG CGCGCGAACT CCCGGACGAG
GGCGGCGACA CCATGTTCGC CAGCATGTAT GCCGCCTGGG ACGCGCTGAC GCCGGGCCTG
AAGAAAACGC TGGAGGGCTT GCGCGCCGTC CATTCCAACG CGCATGTCTT CGGCGCCGCC
GGCTTCTACA AGAACAGCGA TCAGGGCAAG GGCTTCAAGG GTGAAAATCT CGTCAGCGAA
GCCGTCCACC CCGTCGTCGT CACGCATCCC CTGAGCGGTC GTAAGGCGCT CTACGTCAAC
CCCGGCTTCA CCACCCATTT CGAAGGCTGG AGCTGGCTGG AGAGCAAGCC GCTCCTCGAC
TATCTCTTCG CCCATGCGGC GCGGCCCGAA TTCACCTGCC GCTTCCAGTG GCGCGACGGC
TCGGTCGCCT TCTGGGACAA CCGCGCCACC TGGCACTACG CGGTCAACGA CTACCACGGC
GAGCGGCGCC TGATGCACCG CATCACCATT GCCGGCGCGC CCCTCCAATA G
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| Protein sequence | MGAIEVRKMT GGCGAEVLGA DLAKLSNSDM EAVRQAYVDY GVVFFRDQNL TPEDHIAFAR
RWGDIVVNRF FTPTQNPLIA EVRKEKEQTV NIGGGWHTDH SYDAEPAMGS VLVARELPDE
GGDTMFASMY AAWDALTPGL KKTLEGLRAV HSNAHVFGAA GFYKNSDQGK GFKGENLVSE
AVHPVVVTHP LSGRKALYVN PGFTTHFEGW SWLESKPLLD YLFAHAARPE FTCRFQWRDG
SVAFWDNRAT WHYAVNDYHG ERRLMHRITI AGAPLQ
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