| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0824 |
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| Symbol | |
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| ID | 5454831 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 895954 |
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| End bp | 896961 |
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| Gene Length | 1008 bp |
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| Protein Length | 335 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640876395 |
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| Product | 2-nitropropane dioxygenase NPD |
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| Protein accession | YP_001412104 |
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| Protein GI | 154251280 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2070] Dioxygenases related to 2-nitropropane dioxygenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 0.846459 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 55 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTGC CCGACATTCT GAAAAACAGC CTGGAGATAC CCGTCATCGG CTCTCCGCTC
TTCATCGTTT CCGGCCCGGA GCTGGTGATC GCGCAGTGCA AGGCGGGCAT CGTCGGCTCG
TTTCCGGCGC TCAATGCGCG GCCGGCGCAT GTGCTGGAAG AGTGGATCAC GCGGATCAAG
GGCGAGCTTG GCGAATATCA GGCGAAACAT CCCGAGAAGA AGGTGGCGCC CTTCGCCGTC
AACCAGATCT GCCATGCCTC GAACGACCGG CTGGCACATG ACATCGACGT CTGCACGAAG
CTCGAAGTGC CGATCATCAT CACATCGCTC CGACCGCCGG CCGAGGTGAT CGACGCGGCG
CATAGCTATG GCGGCAAGGT CTTCCACGAC GTCATCAATG TGAAGCATGC GAAGAAGGCG
GCGGAACAGG GCGTGGACGG TCTCATCCTC GTTTGTGCCG GCGCGGGCGG ACATGCGGGC
ACGCTGTCGC CCTTCGCGCT GGTGCGCGAG GTGAAGCAGT GGTTCAAGGG AACCGTGATC
CTCTCCGGCG CGCTCAGCGA CGGCTGGGGC ATCGCGGGCG CGCTCGCGAT GGGCGCCGAC
CTTGCCTATA TGGGCACGCG CTTCGTCGCC ACGGCGGAAG CGAACGCCGA ACAGGCGTAC
AAGGATCATC TCATCCAGTA TGCGGCGGAC GACATCGTCT ACACGAACCT CTTTACCGGC
GTGCATGGCA ATTACCTCGC GCCCTCCGTT GCCGCGGCGG GTCTCGACCC GAACAACCTG
CCGGAAGCCG ACAAGTCGAA GATGAATTTC GGCTCGGGCG GCAACATGAA GCAGAAGGCA
TGGAAGGACA TCTGGGGCTC CGGCCAGGGC ATCGGCCAGA TCACCGACGC GCCGCCCGTC
GCCGAACTCA TCGACCGGCT GAAGCGCGAA TATGTGCAGG CCTGCCGCGA ATTCGCTGAG
CGGATGCCGG CAGAAGCACT GACGGCTTCA AGGGCGGCGG CGGAATAA
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| Protein sequence | MALPDILKNS LEIPVIGSPL FIVSGPELVI AQCKAGIVGS FPALNARPAH VLEEWITRIK
GELGEYQAKH PEKKVAPFAV NQICHASNDR LAHDIDVCTK LEVPIIITSL RPPAEVIDAA
HSYGGKVFHD VINVKHAKKA AEQGVDGLIL VCAGAGGHAG TLSPFALVRE VKQWFKGTVI
LSGALSDGWG IAGALAMGAD LAYMGTRFVA TAEANAEQAY KDHLIQYAAD DIVYTNLFTG
VHGNYLAPSV AAAGLDPNNL PEADKSKMNF GSGGNMKQKA WKDIWGSGQG IGQITDAPPV
AELIDRLKRE YVQACREFAE RMPAEALTAS RAAAE
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