Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0821 |
Symbol | |
ID | 5455367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 892434 |
End bp | 893663 |
Gene Length | 1230 bp |
Protein Length | 409 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876392 |
Product | acyl-CoA dehydrogenase domain-containing protein |
Protein accession | YP_001412101 |
Protein GI | 154251277 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.384147 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 54 |
Fosmid unclonability p-value | 0.990129 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCAAAG CCGCCGAAGC CAGCCCCGCG AAATCCGGCG AGAAGCCCAA TCCGCCGCTC GCCTCCTTCA ACTGGCAGGA CCCGTTGCTG CTGGACGAAC AGCTCACCGA GGAAGAGCGC ATGGTGCGCG ACAGCGCGCG CGCCTATTGC GAGGAGAAGC TTTTCACGCG GGTGAAGGAA GCGAACCGGC ACGAGATTTT CCATCGCGAA ATCATGAACG AGATGGGCGC GCAGGGCATG CTCGGGCTGA CGCTGCCGGA GAAATACGGT TGCGCCGGGC TCTCCTATGT CTGCTACGGT CTCGCCGCGC GCGAGGTGGA ACGCGTCGAC AGCGGCTATC GCTCGGCGAT GAGCGTGCAA TCCTCGCTCG TCATGCATCC GATCTATGCC TATGGCACCG AGGCGCAGCG CGAAAAATAT CTGCCGAAGC TCGCGACCGG CGAATGGGTC GGCTGTTTCG GCCTGACCGA GCCCGACCAC GGCTCCGATC CGGGCTCCAT GCGGACGCGG GCGGCGAAGG TCGATGGCGG CTATGTGCTG AACGGCGCGA AGATGTGGAT CACCAATGCG CCGATTTCGG ACCTCGCCGT CGTCTGGGCG AAGACGGAAG ACGATGTCAT CCGCGGCTTT GTGGTCGAGC GCGGTTTCAA GGGTTTCGAG ACGCCGAAGA TCGAGGGCAA GTTCAGCTTG CGTGCGTCGA TTACCGGCGA GATTTCATTG CAGGATGTTT TCGTGCCGGA TGAGAACCTG CTGCCGAATG TGCGCGGGCT TGCCGGTCCC TTCGGCTGCC TCAACCGGGC GCGCTACGGC ATCGCCTGGG GCGCGATGGG CGCAGCGGAA TTCTGCTGGC ATGCGGCCAG GCAATATACG CTCGACCGCA AGCAGTTCGG CCGGCCGCTC GCCGCGAACC AGCTTATCCA GAAGAAGCTC GCCGACATGC AGACGGAAAT CACGCTCGGG CTGCAGGGTT GCCTGCAACT CGGCCGGATG TTCGACGCCG GGACGGCAGC GCCCGCCTCC ATCTCGCTGA TGAAGCGCAA CAATTGCGGC AAGGCGCTCG ACATTGCCCG CGTCGCCCGC GACATGCATG GCGGCAATGG CGTTTCGGAC GAGTATCACG TCATCCGCCA CGTCATGAAC CTTGAAGCGG TGAACACCTA TGAGGGTACG CATGACGTTC ATGCGCTGAT CCTCGGCCGC GAGCAGACAG GCATTCAGGC GTTTTTCTGA
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Protein sequence | MSKAAEASPA KSGEKPNPPL ASFNWQDPLL LDEQLTEEER MVRDSARAYC EEKLFTRVKE ANRHEIFHRE IMNEMGAQGM LGLTLPEKYG CAGLSYVCYG LAAREVERVD SGYRSAMSVQ SSLVMHPIYA YGTEAQREKY LPKLATGEWV GCFGLTEPDH GSDPGSMRTR AAKVDGGYVL NGAKMWITNA PISDLAVVWA KTEDDVIRGF VVERGFKGFE TPKIEGKFSL RASITGEISL QDVFVPDENL LPNVRGLAGP FGCLNRARYG IAWGAMGAAE FCWHAARQYT LDRKQFGRPL AANQLIQKKL ADMQTEITLG LQGCLQLGRM FDAGTAAPAS ISLMKRNNCG KALDIARVAR DMHGGNGVSD EYHVIRHVMN LEAVNTYEGT HDVHALILGR EQTGIQAFF
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