| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0818 |
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| Symbol | |
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| ID | 5455498 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 888407 |
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| End bp | 890116 |
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| Gene Length | 1710 bp |
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| Protein Length | 569 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876389 |
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| Product | ABC transporter related |
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| Protein accession | YP_001412098 |
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| Protein GI | 154251274 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.153053 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 51 |
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| Fosmid unclonability p-value | 0.572134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGCTTA TCAATGCCGG CCGCCTGCTT GAAGCCTTCA TGCCGCTCTT CCTGAAGATG
GGGATCGACA GGATCGCGGT GGGCGACATG CGCCTGGCGG TGCCGGCCCT CGCCATTCTC
GGCCTGATGG TGCTCCGCTA CATCGCCTTC AATCTCGGGC GGCGCTATGT GCGCGAGGTC
GGCGTCGATG CCGCCTTCGA TTTGCGGCAG CGGCTCTACT GGCATCTGGA ATTGCAGGGG
CCGCGCTTCT TCTCCCGCTA TACGACCGGC GACCTGATGG CGCGGGCGAT CAACGACATC
ATGCTCATCC GCCAGCTGAT CGGCATGGGG ACGAGGCTCC TCTTCGTGCT CGGCTTCTCG
GGCATCATCG CCTTTATCTT CATGTTCTAT CAGTCGCCCT CGCTGACGCT TCTGCTGCTC
CCGGCGCTGC CTGTGTTCGC GGTTATCGGA TGGGTGATCG CGAAGAAGAT TTTCACGCAG
TCGACGCAGG TTCAGGAGGG GTTCTCTTCG CTCTCCGCGC AGGTGCAGGA AAACCTGAAC
GGTATCCGCA CCATCCAGAC CCATGCGCAG GAAGCGCGCG AGACCGATCG CTTCGCCGCC
AGTTCGGACC ATTACGCAAA AAACTACTAC AAGCTGATGT CGCTCAATTC CGGCCTCACC
TCCGCGATGC TTATGGCCAC CGGCTTCACC ACGCTGATCG TTGTCGGCTA TGGCGGATTG
CAGGTTGTGG AGGGCGTCAT AACGCTCGGC ACCTTCACCG CGTTCATCTT CTATCTCAAC
ATGATGCTAG CGCCGATCAA GGAAGGCGGC GTGATGGTGA CGCTGTTTCA GCGCGGCGGA
TCGGCGGCGG CGCGGATTTT CGAGATTCTG GATCACGAGC CGGAAATTCG CGACGCGCCC
GACGCCGCGC CGCTGGACGA AATCGGCGGC GCGATCACGC TCAACCATCT CTCCTATGTG
CACCCGGCGG CAAACGGCGA GGGCTGGCCG GCGCTCAACG ATGTATCGCT CGAAATCCGC
AAGGGGGAGA TGATCGCGTT GCTGGGCCGC GTCGGCTCCG GCAAGTCGAC GCTGCTCCGG
CTCATCGTGC GGCTGCTCGA TCCGCCGCCC GGTACGGTCT ATCTCGACGG CCGCGACATC
CGGATGCTGC CCGTATCGCA GGTGCGGAGC GAGGTGGCCA TGGTGCCGCA GGACCCCTTC
CTCTTCGCGA CGCATATTGC GCAGAACATT TCCTACGACA ATCCGGACCG TGCGACGGAG
GAAGTGTGGC GCGCGGCGGA AAGCGCCGAT CTCGAAGCGA CCATCCGCCG CTTTCCTCAC
CGGCTCGAAA CCATGGTGGG GGAGCGCGGC GTGACGCTTT CCGGCGGGCA GAAGCAGCGC
GCGAGCCTTG CGCGCGGGCT TGTGCGCGAG ACGCCGGTGC TGCTTCTCGA TGACTGCTTC
TCCTCCGTCG ACACGGAAAC GGAGGAATTC ATCCTCTCAC GGCTCAAGAC GCTGCGGCAG
GGGCGCACCA CGCTGATGGT ATCGCACCGC GTTTCGACAG CACGGCATGC GGACCGCATC
ATCGTGCTCG ATGAGGGGCG CGTCGCCGAA ATCGGCACGC ATCATGAGCT AATTGCGAAA
GGCGGGCTTT ATGCCACGCT TGAGCGCCAG CAGGGCCGCC GCGACGAACT CGTGCAGACG
CTGACCGAAA CGACGGGAGG CGAGGCATGA
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| Protein sequence | MSLINAGRLL EAFMPLFLKM GIDRIAVGDM RLAVPALAIL GLMVLRYIAF NLGRRYVREV
GVDAAFDLRQ RLYWHLELQG PRFFSRYTTG DLMARAINDI MLIRQLIGMG TRLLFVLGFS
GIIAFIFMFY QSPSLTLLLL PALPVFAVIG WVIAKKIFTQ STQVQEGFSS LSAQVQENLN
GIRTIQTHAQ EARETDRFAA SSDHYAKNYY KLMSLNSGLT SAMLMATGFT TLIVVGYGGL
QVVEGVITLG TFTAFIFYLN MMLAPIKEGG VMVTLFQRGG SAAARIFEIL DHEPEIRDAP
DAAPLDEIGG AITLNHLSYV HPAANGEGWP ALNDVSLEIR KGEMIALLGR VGSGKSTLLR
LIVRLLDPPP GTVYLDGRDI RMLPVSQVRS EVAMVPQDPF LFATHIAQNI SYDNPDRATE
EVWRAAESAD LEATIRRFPH RLETMVGERG VTLSGGQKQR ASLARGLVRE TPVLLLDDCF
SSVDTETEEF ILSRLKTLRQ GRTTLMVSHR VSTARHADRI IVLDEGRVAE IGTHHELIAK
GGLYATLERQ QGRRDELVQT LTETTGGEA
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