| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0817 |
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| Symbol | |
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| ID | 5457021 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 886521 |
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| End bp | 888410 |
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| Gene Length | 1890 bp |
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| Protein Length | 629 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876388 |
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| Product | ABC transporter related |
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| Protein accession | YP_001412097 |
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| Protein GI | 154251273 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.527463 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGACG CGCGGCCGGA AAAGAAAACA CGCGACTACA CCATCTTCGA CGACGAGATG
GAGACGCGCG GCTTCGATTT CGGGCTGATC GTCCGGCTCA TGCGCTGGAT GCGGCCATAT
CGAAGGCAGG GGCTGATCGC GCTCGTCTTC GTTCTGCTGG CAGCGAGCGC GGCTGTGCTT
GCCCCTGTCG TGGTTAGCCG CGTGGTTGTC GACGGCATTC TGCTGCCGAC TTCCGACGCC
GGTGCGCCGG ATTTCGGTCA GAAGGCCCTC AACGCTTTTC TTTCCAGTCT CCTCGACCTT
CATCCGATCG TTGCCGCCTG CATTCTCTAT GGCGTGTGGA CGGTTCTCTG GGCGGCATTC
GGACACGGCT TCCGCGTCAT GCTGGCGCGC ACCGTACTCA ATGGATTGCG CGACCTGAGG
CGCGACCTCT TCGCGCATCT CGAAACGCGT CCTTCAAGTT TCTATGACCG CGTCGCCGTC
GGCCGCGTCA TGACGCGCCT TACCAACGAC ATCGAAACGC TGTTCGAGCT GCTGGCGGGA
TTTGGCGTGC TGCTTGGTGA ATTCGTGCCG TTCTTTGTCG CCGTTTCGAT CATGCTGGCA
CTCAACCCCA CGCTGACATT CGAGTTGATG CTGCTGCTGC CGCTCGCCGC GCTTGCTACA
TGGGCCTTCC GTATCGTCTC GCGGCAGGTC TATCGCGGCA TCCGCTCCAC CATGTCGCGC
CTCAACGAGA ACCTGCAGGA AAACCTGTCG GGTATCGAAG TGGTGCAACT ATATGGCCGC
GAGGAGATCA ACTTTCAGCG CTATACCGGC ATCAATGAGG AAAACCGCGA ACAGGAAAAT
CTCGCCGTCC GGATCGAAAG CTATTATGGC CCGGCGATGG ACAGCATGGC CTTTCTCGCC
ATGGCGGCCA TCATCTGGTT CGGCGGGCAG CATGTGTTCG AAGGCGCGGC GACGCTTGGC
AGCGTCATCC TCTTCGCACA ATTTGCCGAT ATGATGTTCC GGCCCATCGT GGCGATGGGT
GAACAATGGA ACGTCGTCTT TCGCGCCATG GCGAGTTGCG AGCGGATATT CCAGGCTCTC
GACTGGGACG AGGCATTGAA GGAGCCGGAA GAGCCGAAGC CGCTGCCGAA AGACCTGAAA
GGCCAGGTGA CGTTCAACCA TCTGACCTTC GGCTACACGC CAGGCACGAC GATCCTGAAA
GATGTCAGCT TCGACATCAA GCCGGGCGAG CGCATCGCCA TCGTAGGACC GACAGGTTCC
GGCAAGACGA GCCTCATCCG CCTGCTCTGC CGCTTTTACG ATGTGCCGGC AAACTCCATC
CTGATCGACG GCATCGACAT CATGGATGTG ATGCCGTCCG AAATCCGGCA ACGGGTCGGC
GTCGTGCTGC AGGATTTTCA TATTTTCTCC GGCACGGTCT ACGACAATAT CGCGCTTGGA
AACCCTGCGA TCACGCGCGA GATGGCCCGC GAGGCGGCGC GGCTCGTGCA TGCGGATCCT
TTCATCCGCA CCTTGCCGCA AGGCTACGAC ACGATGTTGA CGGAGCGCGG GCGCAATCTC
AGCCATGGCC AGCGGCAGCT TCTCGCATTT GCGCGCGTGC TGGCGATGAA CCCCGAAGTG
CTCGTTCTCG ACGAAGCAAC CGCGAGCATC GATACGGAAA CCGAACTCGT CATCCAGGAT
GCACTTTCCA AAGTCACGCA GGGGCGCACC TCGATCATCA TCGCGCATCG ACTTCAGACG
ATTCGTGAAG CAGACCGCAT CGTCGTGCTC GCCGGTGGCG AAGTGCGCGA AATCGGCAGC
CACGATGAAC TGATTGCCAT AGGCGGTCTT TACAAAACGC TTTATGAGCT TCAAGTTCAG
GACGTGGCCG GCACGAGCAA GAACATCTGA
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| Protein sequence | MSDARPEKKT RDYTIFDDEM ETRGFDFGLI VRLMRWMRPY RRQGLIALVF VLLAASAAVL
APVVVSRVVV DGILLPTSDA GAPDFGQKAL NAFLSSLLDL HPIVAACILY GVWTVLWAAF
GHGFRVMLAR TVLNGLRDLR RDLFAHLETR PSSFYDRVAV GRVMTRLTND IETLFELLAG
FGVLLGEFVP FFVAVSIMLA LNPTLTFELM LLLPLAALAT WAFRIVSRQV YRGIRSTMSR
LNENLQENLS GIEVVQLYGR EEINFQRYTG INEENREQEN LAVRIESYYG PAMDSMAFLA
MAAIIWFGGQ HVFEGAATLG SVILFAQFAD MMFRPIVAMG EQWNVVFRAM ASCERIFQAL
DWDEALKEPE EPKPLPKDLK GQVTFNHLTF GYTPGTTILK DVSFDIKPGE RIAIVGPTGS
GKTSLIRLLC RFYDVPANSI LIDGIDIMDV MPSEIRQRVG VVLQDFHIFS GTVYDNIALG
NPAITREMAR EAARLVHADP FIRTLPQGYD TMLTERGRNL SHGQRQLLAF ARVLAMNPEV
LVLDEATASI DTETELVIQD ALSKVTQGRT SIIIAHRLQT IREADRIVVL AGGEVREIGS
HDELIAIGGL YKTLYELQVQ DVAGTSKNI
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