Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0816 |
Symbol | |
ID | 5456716 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | - |
Start bp | 884598 |
End bp | 886370 |
Gene Length | 1773 bp |
Protein Length | 590 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640876387 |
Product | asparagine synthase (glutamine-hydrolyzing) |
Protein accession | YP_001412096 |
Protein GI | 154251272 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0367] Asparagine synthase (glutamine-hydrolyzing) |
TIGRFAM ID | [TIGR01536] asparagine synthase (glutamine-hydrolyzing) [TIGR03104] asparagine synthase family amidotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 0.816546 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 56 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTGTGGCT TCAGCGGCGA AATAAGATTC GACGGCGTGC AGGCGGATGC CCGTGCGGTA ATGACCATGT GCGACGTCCT CGCACCGAGA GGGCCAGACG GAAGCGGCCT TGCCGCGAGT GGCAATGTGG CAATGGGACA CCGCCGGTTG AAGATCATCG ATCTCAGCGA ACGCGGCAGC CAGCCAATGA CGGATCCGGC GCTTGGGCTA ACCCTCGTGT TCAATGGCTG CATCTACAAT TATCGTGAAT TGCGCGAGAA GCTCGAAGCG AAGGGCTACA GCTTTCATTC GGCAAGCGAC ACGGAAGTCG TGCTGAAGGC ATGGCACGCT TGGCGCGCCG ATGCGCCCAC GCATATGAAC GGCATGTTCG CCTTCGCCGT GCACGAACGT GACAGCGGCC GCACCGCGCT GGCGCGCGAC AGGCTCGGCA TCAAGCCGCT TTATCTCTCC CTCAGCGGCA AACGGCTGCG CTTTGCCTCG ACGCTTCCCG CCATATTGGC GGCGGGCGAT GTCGACACGT CGATCGATCC GCAAGCACTT CAGGCTTACA TGACATGGCA CGCCGTCGTG CCGCCACCGC TGACAATGCT GAAAGGCATC CGCAAGCTGC CGCCGGCGAC CGTCGCCATA TTCGAGGCAG ATGGCAGCCG CCGGGATACC GTCTACTGGT CACTCGGCTA TGAGCGCTCC CGGGAAGACG CAATGCGCAG TGAAGGCGAT TGGGCGGAAA TGCTGCACGC ATCGCTTATC GCCGCCGTCG ACCGGCGAAT GATTGCCGAC GTACCTGTCG GGGTTCTGCT TTCGGGTGGT GTCGATTCAA GCTTGATTGT CGGCCTTCTT GCCGAGGCCG GTCAGCAATC GCTCAATACA TTCTCTATCG GCTTTGAAGC CGCGAATGGA GAGCTCGGCG ACGAGTTCAA ATATTCCGAC ATTGTCGCGA AGCACTTCGG TACGGAGCAT CACAAGATTT TCGTACCGTC AAGCGAGCTG CTCGATGCGC TCCCCCGCAC CATCGGCTCG ATGTCGGAGC CCATGGTGTC GTATGACAAT GTCGGCTTCT TTCTGCTGTC GCAGGAAGTC GCAAAGCATG TGAAGGTCGT ACAGAGCGGC CAGGGCGCCG ACGAGGTTTT TGCCGGCTAT CACTGGTACC CGAAGCTCGC CAATTCAGAC GCGCCGGCAA GCGATTACGC AGCGGCCTTT TTCGACCGCG ATTTCGACGA ATATCGCCGG ACGGTCCAGC CGCAATATCA CGACGGACAT TTCGTCGAAG AATTCATCGA AGATCAGTTC TCCCGCCTCG GCGCAGAACA CGCCGTGGAC AAGGCATTGC GCCTCGACAC CACCATCATG CTCGCCGACG ATCCGGTGAA GCGTGTGGAC AACATGACGA TGGCTTGGGG ACTTGAGGCG CGCGTCCCCT TTCTCGATCA TGAACTTGTG GAGCTTGCGG CGCGCATACC CGCTCAGCAC AAGCTTGCCG ATGGCGGCAA GGGCATTCTG AAGACGGTCG CCCGCAAAGT TATTCCCGCC GACGTGATCG ACCGGCCGAA GGGCTACTTT CCGGTTCCCG CGCTCAAATA TCTGGATGGG CCCTATCTCG CCATGGTGCG GGATGCGTTG AGCACCGATG CGGCAAAGCA ACGGGGGCTC TTCAATCAGG GTTATCTCGA AGAACTGTTC GCCAATCCAT CCGAACACAT CACACCGCTG CGCGGCTCCA AGCTCTGGCA GATCGGCCTT CTGGAGCTGT GGCTGCAGTC GCATTCGGTC TGA
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Protein sequence | MCGFSGEIRF DGVQADARAV MTMCDVLAPR GPDGSGLAAS GNVAMGHRRL KIIDLSERGS QPMTDPALGL TLVFNGCIYN YRELREKLEA KGYSFHSASD TEVVLKAWHA WRADAPTHMN GMFAFAVHER DSGRTALARD RLGIKPLYLS LSGKRLRFAS TLPAILAAGD VDTSIDPQAL QAYMTWHAVV PPPLTMLKGI RKLPPATVAI FEADGSRRDT VYWSLGYERS REDAMRSEGD WAEMLHASLI AAVDRRMIAD VPVGVLLSGG VDSSLIVGLL AEAGQQSLNT FSIGFEAANG ELGDEFKYSD IVAKHFGTEH HKIFVPSSEL LDALPRTIGS MSEPMVSYDN VGFFLLSQEV AKHVKVVQSG QGADEVFAGY HWYPKLANSD APASDYAAAF FDRDFDEYRR TVQPQYHDGH FVEEFIEDQF SRLGAEHAVD KALRLDTTIM LADDPVKRVD NMTMAWGLEA RVPFLDHELV ELAARIPAQH KLADGGKGIL KTVARKVIPA DVIDRPKGYF PVPALKYLDG PYLAMVRDAL STDAAKQRGL FNQGYLEELF ANPSEHITPL RGSKLWQIGL LELWLQSHSV
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