| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0814 |
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| Symbol | |
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| ID | 5455666 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 881706 |
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| End bp | 882821 |
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| Gene Length | 1116 bp |
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| Protein Length | 371 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876385 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_001412094 |
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| Protein GI | 154251270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | [TIGR03106] hydrolase, peptidase M42 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.0829922 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 54 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAGAACC TCAGTATCGA TAGCAACTAT ATGTGCGACG TAATGGAGCG CATGCTGGAA
ACGCCGAGCC CCTCCGGCAT GACCGACATG ATCGTCGGGC TCGTCTGCGA AGAGCTGGAG
AAATTCGGCA TCAACTTCGA GCTTACGAGA CGTGGCGCAA TCCGCGCGGA TCTGGAGGGC
GGCCTTCATT CTCCCGACCG CGCCATTATC GGGCATCTCG ATACGCTTGG CGCAATGGTC
AAGGGCTACC GGGCGAATGG CCGCCTTGAG GTCGTTCCCA TCGGTACGTG GTCCGCGCGT
TTTGCCGAAG GGGCGCGCTG CACGATTTAT GCAGATGGCG GCGCGCGCTA TCGCGGCAGC
ATCCTGCCGC TCAAGGCTTC CGGCCACACG TTCAACGAGG AGATCGACAC GCAGCCGGCT
TCATGGAGCA ACCTGGAGCT GCGTATCGAC GCAAGGACGG GGAGCGAAGC CGAGACCCGT
GCGCTCGGCA TCCATGTCGG CGACACGATC TCGATCGACC CGGAGACGGA GTTCTCCGAC
ACCGGCTTCG TGACCTCGCG GCATCTCGAC GACAAGGCGG GTGTGGCTTC CATGCTTGCC
GCCGCCAAGG CCGTCACGCA ATCGGAGGTG ACGCTGCCCA TCGACTGTCA TCTCCTGTTC
ACCATCTCCG AGGAAGTGGG CGTCGGCTCA TCGCATGTGC TGCATGGCGA TGTCGCGGAA
ATGGTATCTA TCGACAACGG CACCGTTGCG CCGGGTCAGT ATACAAGCGA GTACGGCGTT
ACCGTCGCGA TGCAGGATTC GTCCGGGCCT TTCGACTGGC ATCTGACGAG AAGTCTGCTG
GGGCTCTGCG AGCAGCACGA CATCGAGCAC GCGCGCGATG TGTTTCGCTA CTACCGCAGC
GATGCGGCGG CGGCGCTTGA AGCAGGGAAC GACATTCGCA CCGCCCTCCT CTGCTTCGGC
CTTGATGCAT CGCATGGCTA TGAGCGGGTG CATCTCAGTT CGCTGGAAGC GCTCTCCCGC
CTGCTCGTGC TCTATATGCA GTCGAAGCCG CTCTTCCGGC GCGACAGGGA AGCGCTTGGC
CCCCTCGACG ACCTGCCGAC CGGCGAGCCG AACTAG
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| Protein sequence | MKNLSIDSNY MCDVMERMLE TPSPSGMTDM IVGLVCEELE KFGINFELTR RGAIRADLEG
GLHSPDRAII GHLDTLGAMV KGYRANGRLE VVPIGTWSAR FAEGARCTIY ADGGARYRGS
ILPLKASGHT FNEEIDTQPA SWSNLELRID ARTGSEAETR ALGIHVGDTI SIDPETEFSD
TGFVTSRHLD DKAGVASMLA AAKAVTQSEV TLPIDCHLLF TISEEVGVGS SHVLHGDVAE
MVSIDNGTVA PGQYTSEYGV TVAMQDSSGP FDWHLTRSLL GLCEQHDIEH ARDVFRYYRS
DAAAALEAGN DIRTALLCFG LDASHGYERV HLSSLEALSR LLVLYMQSKP LFRRDREALG
PLDDLPTGEP N
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