| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0812 |
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| Symbol | |
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| ID | 5456147 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 877221 |
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| End bp | 879200 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640876381 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_001412092 |
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| Protein GI | 154251268 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.183722 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.24775 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA CAGGCTGGGG GGCCTATGCT GCCCTTACCC TTTTGGCGTT CGCGGCGATG
CCCGCACATG CCGAAGAGAC GACCGAACTG CCGGACCTTC TGATTTCGGC CGGTGTCGAA
CCCCTTCCCA CCCGGGAAGT TGCAAGCTCC TTCACGATCG TTACGGCGGA AGAGATCGAA
ACCTTCCAGT ATCGCGACCT GACCGACGCG CTGCGGTCGG TTCCGGGCCT CCATGTGGCG
ACGTCCGGCC CCCGCGGCGG GCAGACCTCC GTCTTCACGC GCGGCGCCAA TTCCAACCAG
ACGCTGGTCA TGATCAACGG GCTGCCGATC AACGACTCGG CTTCTCCGGG CGGCGCCGCC
AATCTCGCCA ACATACCGCT CGACAATGTG GATCGCATTG AGGTGGTGCG CGGTCCGCAA
AGCGCGCTCT ATGGCAGCCA GGCCATCGGC GGCGTCATCA ACATCATCAC GAAGACGGGT
GCCGGCGCAC CCGTCACCAG CCTGCGAGTC GAAGGCGGCA CGCTCGGAAC GCTCAATACA
CATGCGTCGA CGGGCGGAAG TCTCGACGGT GTCGATTACT TCCTCTCCCT CTCGCGTGAA
GCGACAAACG GCTCGGATGC GACACCCACC CGGCTGCGCG ATGCGCGTGG CGAGGAGAAG
GACGGCAATG AAGTCGGCTC CGTCTCCGGC CGCATCGGCG CGAAGCTCAA TGAAAACCTG
AGCGCTTCGG CTTTCATTCA ATACACGAAG TCGGAGACGG ACATTGACGA TGACGGTTCA
GACGCCGGTT TCGTTCAGGT CTATCAGAAC TTCGACAGCA CCTATGATTC GAACCGTCTC
ATCATGGCTG GCGACCTTTC CGGCAGCTTC TTCGACAATA AGTGGCGGCC GAAACTCTCC
GCCGGCATTA CCAACCAGAA ATCGTTTCTC GACGACCAGC CCGATCCCGG CGGCTCGATC
TATCTGAGCG ACGTCGACTA CAAAGGTAAG ACGGTTACGG TCCGCTTCGA CAATGCCTTC
GACATTCATC CGCAGCATCT GTTGACGGCG GGCGCGAGCT ACACGCGGGA CGAATATTCA
TCGAGCGGTA TCCGCGATCT CGGCGGCTTC ATCGTTACGC CGGTATCTGA CGCCGACACA
GACGCGTTCG CGGTTTATGC CAGCGACCAC ATGACCTTCG GCGAGCGTTT CTTTGCCACC
GTCTCCACGC GCTACGACAT GCCGGAAGAC ATGGAGGACC GCTTCACCTT CACGATCGCT
CCGGGCTATT ACCATCCTGA AACCGACACG CGCCTGACCT TCTCCTACGG CACAGGCTTC
AAGACGCCGT CGCTCTATCA GCGTTACGGA CAGGAAATTA ATGCCTTCTT CGGAACCATC
ACGCAGTACA CCGGAAATCC GGACCTCAAG CCCGAAAAGA GCAAGGCCTG GGAAGTCGGC
GTCGAGCAGG GCTTTCTGGA AGGCCGCGGT CTGGCCGGCG TCACCTGGTT CGACAGCGAA
GTCGAAGACG CGATTTCCAT CGAGTTCGAC CTTGTAGGAA ATTCGAGCGC GGTCAACGTC
GATAAGTTCG ATGCGAAGGG CATCGAGACC TTCATCCAGT TCAAGCCCTC GCCTGAAGTC
ACAGCGCGTA TCGACTACAC GCTGACGATC TTCAAGGCCG ATCCGTTCGT GACCACCATG
ACCAGGCGGC CTCGCCACCT GATCGGCTTC ACCGGCAGTT GGGAGCCGGT CGCGGGCACG
GTCCTCTCGA CCAATGTGCA ATGGGTGGAT ATCTACCGCG ACATTCCGCG CGACTCCTTC
GGTTTCTTCC TCGATCCGGG GCCTTATACC GTGGTCAACA TCGCCGGTTC GCACAAGCTG
ACCGACAATG TGACGCTGAC GGCACGTGTG AACAACCTGC TCGATACACG CTATGAACCG
GTCAACGGTT TGGAAGCAGC CGGTATCGAA GCACTGGCAG GCGTCGTCTT CACGTTCTGA
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| Protein sequence | MKKTGWGAYA ALTLLAFAAM PAHAEETTEL PDLLISAGVE PLPTREVASS FTIVTAEEIE
TFQYRDLTDA LRSVPGLHVA TSGPRGGQTS VFTRGANSNQ TLVMINGLPI NDSASPGGAA
NLANIPLDNV DRIEVVRGPQ SALYGSQAIG GVINIITKTG AGAPVTSLRV EGGTLGTLNT
HASTGGSLDG VDYFLSLSRE ATNGSDATPT RLRDARGEEK DGNEVGSVSG RIGAKLNENL
SASAFIQYTK SETDIDDDGS DAGFVQVYQN FDSTYDSNRL IMAGDLSGSF FDNKWRPKLS
AGITNQKSFL DDQPDPGGSI YLSDVDYKGK TVTVRFDNAF DIHPQHLLTA GASYTRDEYS
SSGIRDLGGF IVTPVSDADT DAFAVYASDH MTFGERFFAT VSTRYDMPED MEDRFTFTIA
PGYYHPETDT RLTFSYGTGF KTPSLYQRYG QEINAFFGTI TQYTGNPDLK PEKSKAWEVG
VEQGFLEGRG LAGVTWFDSE VEDAISIEFD LVGNSSAVNV DKFDAKGIET FIQFKPSPEV
TARIDYTLTI FKADPFVTTM TRRPRHLIGF TGSWEPVAGT VLSTNVQWVD IYRDIPRDSF
GFFLDPGPYT VVNIAGSHKL TDNVTLTARV NNLLDTRYEP VNGLEAAGIE ALAGVVFTF
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