| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0810 |
|---|
| Symbol | |
|---|
| ID | 5454122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Parvibaculum lavamentivorans DS-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009719 |
|---|
| Strand | - |
|---|
| Start bp | 875390 |
|---|
| End bp | 876199 |
|---|
| Gene Length | 810 bp |
|---|
| Protein Length | 269 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 640876379 |
|---|
| Product | enoyl-CoA hydratase/isomerase |
|---|
| Protein accession | YP_001412090 |
|---|
| Protein GI | 154251266 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 0.748292 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 0.305394 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCCG ATTTCCGCGA AATTCTTTTC GAGACGCCCG AGCCTCACAT TGCGAAAGTG
ACGCTCAATC GCCCGGCTCA AATGAACGCC TATTCGACGC TGCTTTGCGC GGAACTCGTC
GAGGCGCTCG ACATCTATCT CCGCGACGAC GATCTCCGAT GCCTCATCCT TACAGGCGCC
GGGCGCGGCT TCTGCGCCGG TGGCGATATC AGCGGCGCGG ACGAGGAGCA TGAGGCGCTG
ATGAAGACGC AGCTTTCGCA TGGCCGCGAA ATGCGCGACG GCATGCATCG CGTCATCCTC
GCCTTCTCGC GCCTCGACAA GCCGACCATC GCCATGGTGA ACGGCCCCGC CGTCGCGGGC
GGGCTCACGC TTGCTCTCTC CTGCGATATG CGGATTGCCG CCGACACGGC AAAGCTCGGC
GATACATCGG GCCGTTTCGG TCTCTTGCCG GATGAGGGCG GCGCCTGGTT CTTTCCCCGC
TTCATGGGTC TCGACCTCGC GCTCAAGATG ACCATGCTCG CCGAGGTCTA CAGTGCGGAC
GAGGCGGAAG ATCTCGGCCT TGTCACCGAG GTCGTTCCCG CCGCCGCGCT CGAGGCCCGT
GTGATGGAGC TTGCGCGAGG TCTTGCTGCC CGCGCGCCGC TCGCCGTCCG CCTCGCCAAG
TCCATGATGA TGCGGGGCCA GACGCTGTCG CTCGAACAGT CGCTGGGCGA TGCCGCCCTC
TCCGTCATGG TCACGAACCC CAGCGCCGAT GTCCGCGAGG GCGTGAAGGC TTTCTTCGAC
AAGCGGGAAC CCAAATTCAA AGGTAAATGA
|
|---|
| Protein sequence | MAADFREILF ETPEPHIAKV TLNRPAQMNA YSTLLCAELV EALDIYLRDD DLRCLILTGA
GRGFCAGGDI SGADEEHEAL MKTQLSHGRE MRDGMHRVIL AFSRLDKPTI AMVNGPAVAG
GLTLALSCDM RIAADTAKLG DTSGRFGLLP DEGGAWFFPR FMGLDLALKM TMLAEVYSAD
EAEDLGLVTE VVPAAALEAR VMELARGLAA RAPLAVRLAK SMMMRGQTLS LEQSLGDAAL
SVMVTNPSAD VREGVKAFFD KREPKFKGK
|
|---|
| |