| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0806 |
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| Symbol | |
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| ID | 5456759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 870858 |
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| End bp | 872093 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640876375 |
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| Product | pyridoxal-dependent decarboxylase |
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| Protein accession | YP_001412086 |
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| Protein GI | 154251262 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0076] Glutamate decarboxylase and related PLP-dependent proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 45 |
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| Fosmid unclonability p-value | 0.168032 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGAACGA CGCTGCCGAA AAAGGGCAAG GACTGGAGCG AATTGAAGAC GGAAATGGAA
GCCCGCGGCT CCCACGACGT CAAATGGCGC GACGGCAAGA CCGCCGTCTA TGTCTTCAAT
GCCGGTCCCG AGGTCGCACA GGTCCAGAAG GAAGCCTATG CGATGTTCAT GTCGGAAAAC
GGCCTCGGGC CGATGGCCTT TCCGAGCCTG AAACAGATGG AGGACGAGGT GGTCTCGATG
GGCCTCGGCC TCCTGCACGG GCCGGACGGC TCCGTCGGCA ACATCACCTC GGGCGGCACG
GATTCGATCA CCATGGCGAT CAAGACCGCC CGCGATTTCG CGCGCAAGAC AAAGGGCGTC
ACGGGCCAGT GCAACATCGT CGCGCCCTGG TCCGCGCATC CCGCCTTCGA CAAGGCGGCG
AAGATGATGG AAATCGAAAT GCGGCGCGTG CCCTGCGCCG ATCTTCTCGC CGATGTCGGT
GCGATGGAAA AGAAGATCGA TGCCAACACC ATCATGCTGG TCGGCTCCGC GCCCTGCTTT
CCCTATGGCC TGATCGATCC CATCGAGGCG CTGGGCAAGC TCGCCGAGAA GAAAAACCTC
TGGCTCCATG TCGATGCCTG TGTCGGCGGC TATATCGCGC CCTTCGTCCG CATGAATGGC
GGCGACATTC CGCCTTTCGA TTTCGAGGTG CCCTCCGTCT CCTCCATGTC GGCGGACCTG
CACAAATACG GCTATTGCGC CAAGGGTGCC TCCACCGTCC TCTTCCGTTC GGAAGAACTT
CGCGCGCATA TGATCTTCGA CTGCGCGGAC TGGCCGGGCG GGCGGATGGT CACGCCGACG
CTTGCCGGCA CGCGGCCAGG CGGCGCCATC GCGGCGGCGT GGGCCGTCAT GAATTTCCTC
GGCGAGGAAG GCTATCGCGC AAAGCACAAA CAGGTGACGG ACGCGCGCGA GGCAATCGAG
GCGGGCATCG CGAAGCTCGG CTTCCGCGTG CTCGGCCGTC CGCAGCTCGG CATCGTCTCC
TTCACACATG ATGAGGAAGA CCCCTTCGCT GTCTGGGGCA AGCTTTTCGA GCGCGGCTGG
TTCACCAGCC TGACGACCGA GCCGAAGGGG CTCCATCTCA TGCTCTCGCC TTTCCACGCG
CAGGTGACGG GCACCTACCT CGCCGATCTC GAATGGGCAC TTGGCGAAGT GAAAGCCGGC
AATGAAGGCA AGAAGCGGGA AGCGCGCTAC AGCTGA
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| Protein sequence | MGTTLPKKGK DWSELKTEME ARGSHDVKWR DGKTAVYVFN AGPEVAQVQK EAYAMFMSEN
GLGPMAFPSL KQMEDEVVSM GLGLLHGPDG SVGNITSGGT DSITMAIKTA RDFARKTKGV
TGQCNIVAPW SAHPAFDKAA KMMEIEMRRV PCADLLADVG AMEKKIDANT IMLVGSAPCF
PYGLIDPIEA LGKLAEKKNL WLHVDACVGG YIAPFVRMNG GDIPPFDFEV PSVSSMSADL
HKYGYCAKGA STVLFRSEEL RAHMIFDCAD WPGGRMVTPT LAGTRPGGAI AAAWAVMNFL
GEEGYRAKHK QVTDAREAIE AGIAKLGFRV LGRPQLGIVS FTHDEEDPFA VWGKLFERGW
FTSLTTEPKG LHLMLSPFHA QVTGTYLADL EWALGEVKAG NEGKKREARY S
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