Gene Plav_0802 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0802 
Symbol 
ID5455330 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp867646 
End bp868128 
Gene Length483 bp 
Protein Length160 aa 
Translation table11 
GC content65% 
IMG OID640876371 
ProductMarR family transcriptional regulator 
Protein accessionYP_001412082 
Protein GI154251258 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.0707582 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones49 
Fosmid unclonability p-value0.338446 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTGCCA ATCAGAACCC CGAACGCAGC ACCGGCTTTC TGTTGCGCGA TAATTCGCGT 
TTCATGAAAA CCGCCTTCAA CGACAGGGTG AGCGGTCTGA CGCAGGCGCA ATGGGGCGCT
CTCGCCCATC TTTCTCGCCA TCAGGGCCTG AACCAGGTGG GGCTCGCCGA CCTTCTCGAG
GTACAGCCCA TCACCGTCGC ACGGCTCATC GACAAGCTGG TGGCGCTCGG CGTGGTGGAG
CGGCGGCCGG ACCCGAACGA CCGGCGCGCG CAACAGCTCT TCCTCACGCC CAATGCGCAG
CCCCTGCTCG ATCAGCTATG GGAAGCGGGC GACGAAATTC TCGATGAGGC CTATGACGGG
TTCACAGCCG AGGAGCGCGC CAGCTTCATC GACATGCTGG TGCGGATGCG CGGCAATCTC
GCCCGCTTCG CGCAGCATGG CAGCAGCCGC AGCCGCGCGC CCAGCTACCG CAAGGCGGGC
TGA
 
Protein sequence
MPANQNPERS TGFLLRDNSR FMKTAFNDRV SGLTQAQWGA LAHLSRHQGL NQVGLADLLE 
VQPITVARLI DKLVALGVVE RRPDPNDRRA QQLFLTPNAQ PLLDQLWEAG DEILDEAYDG
FTAEERASFI DMLVRMRGNL ARFAQHGSSR SRAPSYRKAG