Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0799 |
Symbol | |
ID | 5456313 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 864152 |
End bp | 865792 |
Gene Length | 1641 bp |
Protein Length | 546 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640876368 |
Product | putative acyl-CoA synthetase |
Protein accession | YP_001412079 |
Protein GI | 154251255 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0930157 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 0.263269 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGGGAT TGATGCAGGA CTGGCCGCTG CGCGTATCGA CGATCATCGA CCACGCCGCG CGGTTTCATG GCGACCGCGA AATCGTGACG CGCTCGGTCG AGGGGCCGAT TACGCGCACC ACCTACAAGG AAGTCCATCT GCGCGCCCGC AAGGTGGCGC AGGCGCTGGG CCGCCTCGGC GTGAAGGAAG GCGACATCGT CGCCACCATG GCGTGGAACA CGAGCCGCCA TCTCGAAGCC TGGTACGGCA TCATGGGCAT GGGCGCGGTC TGCCACACGC TGAACCCGCG CCTCTTCGCC GAACAGCTCG TCTACATCAT CAACCACGCG GAAGACAAAA TCATCTTCCT CGACCTGACC TTCGTGCCGA TCCTCGAAGG CATCGCCGAC AAGCTGCCCA AGGTGAAGGC CTATGTCGTG ATGACCGACA AGGCGCATAT GCCGGACACG AAACTCCCGA ACGCGCTCTG CTTCGAGGAG ATCGTGGAAG CTGAAGACGG CAACTTCAAA TGGGCGGAAG TGGACGAGAA CGCGGCCTGC GGCCTCTGCT ACACCTCCGG CACGACGGGG AACCCCAAGG GCGTGCTCTA TTCGCACCGC TCCAACGTGA TCCATTCCAT GGCCGCCAAT ATGGGCGACG CGCTCGGCAT GAAATGCGCC GACGCGATCC TGCCTGTGGT GCCGATGTTC CATGCCAACG CCTGGGGCAT CGCCTTTGCG GCACCCGCCG TCGGCGCGAA GATCGTCATG CCCGGCGCGC AGATGGACGG CCAGAGCATC TATGAGCTTC TCGACAAGGA GCAGGTGACG GTGACGGCGG CGGTGCCGAC CGTCTGGCTG ATGCTGCTGC AATATCTGGA GAAGACCGGC GCGCAACTGC CGAAGCTCGA CCGTGTGGTG ATCGGCGGCT CGGCCGCGCC GCGCTCGATG ATCGAGGTCT TCGAGAAGAA TTACGACGTG AAGGTGTTCC ACGCCTGGGG CATGACGGAA ATGTCGCCCA TGGGCACGCT CGGCGCCTTG AAGGCCGGCA TGGAAGACCT GCCGCTCGAC AAGCAGATCG ACGTGAAGGT GAAGCAGGGC CGCGCGATCT ACACGGTCGA AATGAAGATC ACCGACGATG ACGGCAACGA GCTGCCCTCC GACGGCAAGG CCTTCGGCCA CCTGATGGTG CGCGGGCCGG CGATCGCCGG CGCCTATCTC AAGGGCGAGG GCGGCAACAT CCTCGACAAG GATGGCTGGT TCGACACCGG CGACGTCGCT ACCATCGACG CGCAGGGCTA TATGCAGATC ACCGACCGCG CCAAGGACGT GATCAAGTCC GGCGGCGAAT GGATTTCCTC GATCGAAATC GAGAACCTCG CGGTCGGCCA TCCGAAAGTA ACGGAAGCCG CCGTCATCGG CATCCTGCAT CCGAAGTGGG ACGAACGCCC GCTGCTGATC GTGGTGCCGA AGGAAGGCGA AAACCCGACC AAGGAAGAAA TCCTGAGCTA CATGGAAGGC AAGATCGCCA AATGGTGGAT GCCGGACGAT GTGGTCTTCG TGAAGGAAAT CCCGCACACG GCAACCGGCA AGATCCAGAA GCTGACGCTG CGCGAACAGT TCAAGGACTA CAAGCTGCCG ACCGCCAACG CCGCCGAGTA G
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Protein sequence | MQGLMQDWPL RVSTIIDHAA RFHGDREIVT RSVEGPITRT TYKEVHLRAR KVAQALGRLG VKEGDIVATM AWNTSRHLEA WYGIMGMGAV CHTLNPRLFA EQLVYIINHA EDKIIFLDLT FVPILEGIAD KLPKVKAYVV MTDKAHMPDT KLPNALCFEE IVEAEDGNFK WAEVDENAAC GLCYTSGTTG NPKGVLYSHR SNVIHSMAAN MGDALGMKCA DAILPVVPMF HANAWGIAFA APAVGAKIVM PGAQMDGQSI YELLDKEQVT VTAAVPTVWL MLLQYLEKTG AQLPKLDRVV IGGSAAPRSM IEVFEKNYDV KVFHAWGMTE MSPMGTLGAL KAGMEDLPLD KQIDVKVKQG RAIYTVEMKI TDDDGNELPS DGKAFGHLMV RGPAIAGAYL KGEGGNILDK DGWFDTGDVA TIDAQGYMQI TDRAKDVIKS GGEWISSIEI ENLAVGHPKV TEAAVIGILH PKWDERPLLI VVPKEGENPT KEEILSYMEG KIAKWWMPDD VVFVKEIPHT ATGKIQKLTL REQFKDYKLP TANAAE
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