Gene Plav_0799 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0799 
Symbol 
ID5456313 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp864152 
End bp865792 
Gene Length1641 bp 
Protein Length546 aa 
Translation table11 
GC content63% 
IMG OID640876368 
Productputative acyl-CoA synthetase 
Protein accessionYP_001412079 
Protein GI154251255 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0930157 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value0.263269 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGGGAT TGATGCAGGA CTGGCCGCTG CGCGTATCGA CGATCATCGA CCACGCCGCG 
CGGTTTCATG GCGACCGCGA AATCGTGACG CGCTCGGTCG AGGGGCCGAT TACGCGCACC
ACCTACAAGG AAGTCCATCT GCGCGCCCGC AAGGTGGCGC AGGCGCTGGG CCGCCTCGGC
GTGAAGGAAG GCGACATCGT CGCCACCATG GCGTGGAACA CGAGCCGCCA TCTCGAAGCC
TGGTACGGCA TCATGGGCAT GGGCGCGGTC TGCCACACGC TGAACCCGCG CCTCTTCGCC
GAACAGCTCG TCTACATCAT CAACCACGCG GAAGACAAAA TCATCTTCCT CGACCTGACC
TTCGTGCCGA TCCTCGAAGG CATCGCCGAC AAGCTGCCCA AGGTGAAGGC CTATGTCGTG
ATGACCGACA AGGCGCATAT GCCGGACACG AAACTCCCGA ACGCGCTCTG CTTCGAGGAG
ATCGTGGAAG CTGAAGACGG CAACTTCAAA TGGGCGGAAG TGGACGAGAA CGCGGCCTGC
GGCCTCTGCT ACACCTCCGG CACGACGGGG AACCCCAAGG GCGTGCTCTA TTCGCACCGC
TCCAACGTGA TCCATTCCAT GGCCGCCAAT ATGGGCGACG CGCTCGGCAT GAAATGCGCC
GACGCGATCC TGCCTGTGGT GCCGATGTTC CATGCCAACG CCTGGGGCAT CGCCTTTGCG
GCACCCGCCG TCGGCGCGAA GATCGTCATG CCCGGCGCGC AGATGGACGG CCAGAGCATC
TATGAGCTTC TCGACAAGGA GCAGGTGACG GTGACGGCGG CGGTGCCGAC CGTCTGGCTG
ATGCTGCTGC AATATCTGGA GAAGACCGGC GCGCAACTGC CGAAGCTCGA CCGTGTGGTG
ATCGGCGGCT CGGCCGCGCC GCGCTCGATG ATCGAGGTCT TCGAGAAGAA TTACGACGTG
AAGGTGTTCC ACGCCTGGGG CATGACGGAA ATGTCGCCCA TGGGCACGCT CGGCGCCTTG
AAGGCCGGCA TGGAAGACCT GCCGCTCGAC AAGCAGATCG ACGTGAAGGT GAAGCAGGGC
CGCGCGATCT ACACGGTCGA AATGAAGATC ACCGACGATG ACGGCAACGA GCTGCCCTCC
GACGGCAAGG CCTTCGGCCA CCTGATGGTG CGCGGGCCGG CGATCGCCGG CGCCTATCTC
AAGGGCGAGG GCGGCAACAT CCTCGACAAG GATGGCTGGT TCGACACCGG CGACGTCGCT
ACCATCGACG CGCAGGGCTA TATGCAGATC ACCGACCGCG CCAAGGACGT GATCAAGTCC
GGCGGCGAAT GGATTTCCTC GATCGAAATC GAGAACCTCG CGGTCGGCCA TCCGAAAGTA
ACGGAAGCCG CCGTCATCGG CATCCTGCAT CCGAAGTGGG ACGAACGCCC GCTGCTGATC
GTGGTGCCGA AGGAAGGCGA AAACCCGACC AAGGAAGAAA TCCTGAGCTA CATGGAAGGC
AAGATCGCCA AATGGTGGAT GCCGGACGAT GTGGTCTTCG TGAAGGAAAT CCCGCACACG
GCAACCGGCA AGATCCAGAA GCTGACGCTG CGCGAACAGT TCAAGGACTA CAAGCTGCCG
ACCGCCAACG CCGCCGAGTA G
 
Protein sequence
MQGLMQDWPL RVSTIIDHAA RFHGDREIVT RSVEGPITRT TYKEVHLRAR KVAQALGRLG 
VKEGDIVATM AWNTSRHLEA WYGIMGMGAV CHTLNPRLFA EQLVYIINHA EDKIIFLDLT
FVPILEGIAD KLPKVKAYVV MTDKAHMPDT KLPNALCFEE IVEAEDGNFK WAEVDENAAC
GLCYTSGTTG NPKGVLYSHR SNVIHSMAAN MGDALGMKCA DAILPVVPMF HANAWGIAFA
APAVGAKIVM PGAQMDGQSI YELLDKEQVT VTAAVPTVWL MLLQYLEKTG AQLPKLDRVV
IGGSAAPRSM IEVFEKNYDV KVFHAWGMTE MSPMGTLGAL KAGMEDLPLD KQIDVKVKQG
RAIYTVEMKI TDDDGNELPS DGKAFGHLMV RGPAIAGAYL KGEGGNILDK DGWFDTGDVA
TIDAQGYMQI TDRAKDVIKS GGEWISSIEI ENLAVGHPKV TEAAVIGILH PKWDERPLLI
VVPKEGENPT KEEILSYMEG KIAKWWMPDD VVFVKEIPHT ATGKIQKLTL REQFKDYKLP
TANAAE