| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0798 |
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| Symbol | |
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| ID | 5455759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | - |
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| Start bp | 862495 |
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| End bp | 863952 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 640876367 |
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| Product | amidase |
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| Protein accession | YP_001412078 |
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| Protein GI | 154251254 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.623196 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 47 |
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| Fosmid unclonability p-value | 0.286428 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAGAGC TTCATTTCCG CTCCGCGAGC GATCTCGGCC GGATGATCCG CCGCCGCGAG
GTGAGTTCGG CCGAACTCAC CGACCATTTC ATCGCCCGGG TGGAAAAGCT CGATCCGAAG
ATCAACGCCG TCGTCGCGCG CGATTTCGAG GGCGCGCACA AGGCCGCCGA CGCCGCCGAC
GAGGCGCTGG CGCGGGGCGA GATCCAGGGC CCGCTGCACG GCCTCCCCTT CACCATCAAG
GATGCCTATG AAGTCGCGGG CCTCACCTCC ACCGGCGGCG CGCCTGTCTG GAAGGATCAT
GTCCCCGCCA CCAGCGCCAC CGCCATCGGG CGGCTGCAGC GCGCGGGCGC CATCGTCTTC
GGCAAGACGA ACGTGCCCTA TCTCTCCGGC GACCTGCAGA CCTATAACGA CATCTACGGC
ACCACCAACA ATCCGTGGGC GCTCGACTGC GGGCCCGGCG GTTCGTCGGG CGGTTCCGCC
GCCTCGCTCG CGGCCGGTTT CACGGCGGCC GAATTCGGCT CCGACATCGG CGGCTCGATC
CGCACGCCCG CCCATCTCTG CGGCGTCTTC GGCCACAAGC CGACATTCGA CATCGTGCCG
AAGCGCGGCC ATCTCTCGCC GCCGCCCGGC GCGCTTTCCG AAGGCGATCT CTCGGTCGCG
GGCCCGCTCG CCCGCAGCGC CGAAGACCTG CAACTCCTGC TCGACATCGC CGCCGGTCCC
GACTGGGCGG ACGCCATCGG CTGGAAGCTC GACCTGCCGC AAGCCCGCGC GAAGACACCG
AAGGAGCTTC GCGTCGCGGT CTGGATCGAG GATGAATTCT GCGACATCGA CAAGGAGAGC
GCCGAACTTC TCACCAACGC CGCCAACGCA CTCGCCGATG CGGGCGCCAA TGTCGACTGG
CAGGCGCGGC CCGATTTCAC GCTGGCCGAC ATCACCGAGG CCTATCTGAT CCTGCTCCAT
TCGCAGATCG GCGCGGGCAT GCCGCAAAGC ATCCGCGATC ACTGGTCGGA ATTGAAGAAG
AGCTTCAAGG CGGACGACAA GAGCCACCGC GCGCTGCAGG CCATCGGCGG CACGCTCTCG
CTCGCGGAGC GCGCTGTCTG GAAGGAGAAG CAGGCCCAGC TCCGCTGGCG CTGGCATCAG
TTCTTCCAGA AATACGATGT CGTCCTCGCG CCCGTTCTGA TGCGCCCCGC CTTCGAGCAC
AATCACGAAA CGAACTGGCA CAAGCGCGAA CTGGACGTGA ACGGCGTCAT GCGTCCCTAT
ATGGACGTGC TCATCTGGGC CGGCCCGGCC GTCGTCTCCT ACCTCCCCGC CTCCGTCGCG
CCGGTCGGCA TCACAAGCGA AGGCAAGCCC GTCGGCATCC AGATCATCGG CCCGCATCTG
GAGGATCGCA CGACCATCGC AGTGGCGGGC ATGTTCGAGG AGATACTGGG CGGCTTCAAA
CCGCCGAAGG GGTGGTGA
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| Protein sequence | MTELHFRSAS DLGRMIRRRE VSSAELTDHF IARVEKLDPK INAVVARDFE GAHKAADAAD
EALARGEIQG PLHGLPFTIK DAYEVAGLTS TGGAPVWKDH VPATSATAIG RLQRAGAIVF
GKTNVPYLSG DLQTYNDIYG TTNNPWALDC GPGGSSGGSA ASLAAGFTAA EFGSDIGGSI
RTPAHLCGVF GHKPTFDIVP KRGHLSPPPG ALSEGDLSVA GPLARSAEDL QLLLDIAAGP
DWADAIGWKL DLPQARAKTP KELRVAVWIE DEFCDIDKES AELLTNAANA LADAGANVDW
QARPDFTLAD ITEAYLILLH SQIGAGMPQS IRDHWSELKK SFKADDKSHR ALQAIGGTLS
LAERAVWKEK QAQLRWRWHQ FFQKYDVVLA PVLMRPAFEH NHETNWHKRE LDVNGVMRPY
MDVLIWAGPA VVSYLPASVA PVGITSEGKP VGIQIIGPHL EDRTTIAVAG MFEEILGGFK
PPKGW
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