| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0795 |
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| Symbol | |
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| ID | 5454059 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 859483 |
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| End bp | 860238 |
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| Gene Length | 756 bp |
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| Protein Length | 251 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640876364 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_001412075 |
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| Protein GI | 154251251 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 38 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 49 |
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| Fosmid unclonability p-value | 0.347308 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACACAAA TTCCGAATTC AGAGCGAAAG ACGCTGATCC TGACCGGCGC GAGCCGGGGG
ATCGGTCATG CGACGGTGAA GCGCTTTTCG AGCGCGGGCT GGCGCGTGAT TACCTGTTCG
CGGCACCCCT TTCCCGAGGA CTGCCCGTGG GAAGCGGGCC CTGAAGACCA TATCCAGGTC
GACCTCGCCG ATGTGAAGAA CACCGAGAAC GCCATCGCGG AAATGCGCGA GCGGCTGAAG
GATCAGGGCG GGCGGCTGGA CGCGCTGGTG AACAATGCTG CGATTTCGCC GAAGGGGCCG
GGCGGCTCGC GGCTCGGCGT TTTCGATACC GGCGTCGATA CCTGGTATCA GGTCTTTCAG
GTGAATTTCT TCGCGCCGGT AATGCTTGCG CGCGGGCTTG TCGAGGAATT GAAGGCGGCG
CAGGGCTCGG TCGTGAACGT GACCTCGATT GCGGGCGAGC GCGTGCATCC CTTCGCAGGC
TCCGCCTATG CGACATCGAA GGCGGCGCTC GCCTCGCTGA CGCGGGAAAT GGCATCGGAG
TTCGGGCGTC TTGGCGTACG GGTGAACGCG ATTTCACCCG GCGAGATCGA TACGGCGATC
CTGTCGCCGG GGACGGAAAA GATCGTCGCG GAAATTCCGA TGCAAAGGCT CGGCAAGCCG
GAAGAGGTGG CGCGGACGAT TTATTTTCTG TGCACGGATC AGTCGAGCTA TGTGAACGGG
GCCGAGATTC AGATCAATGG CGGGCAGCAC GTTTAA
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| Protein sequence | MTQIPNSERK TLILTGASRG IGHATVKRFS SAGWRVITCS RHPFPEDCPW EAGPEDHIQV
DLADVKNTEN AIAEMRERLK DQGGRLDALV NNAAISPKGP GGSRLGVFDT GVDTWYQVFQ
VNFFAPVMLA RGLVEELKAA QGSVVNVTSI AGERVHPFAG SAYATSKAAL ASLTREMASE
FGRLGVRVNA ISPGEIDTAI LSPGTEKIVA EIPMQRLGKP EEVARTIYFL CTDQSSYVNG
AEIQINGGQH V
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