Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Plav_0792 |
Symbol | |
ID | 5453761 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Parvibaculum lavamentivorans DS-1 |
Kingdom | Bacteria |
Replicon accession | NC_009719 |
Strand | + |
Start bp | 856965 |
End bp | 858551 |
Gene Length | 1587 bp |
Protein Length | 528 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 640876361 |
Product | hypothetical protein |
Protein accession | YP_001412072 |
Protein GI | 154251248 |
COG category | [S] Function unknown |
COG ID | [COG2187] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 0.346746 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGGATA GCGCGGAAAA CGACGCCCTG CTTGCATTTC TGGCGATGCC GGAAACCTAT GGCCTCGCTT CCGGCGAGAC GGTGACGCGG ATCGACACGC ATGCCTCGCA TGTCTTTCTT GCCGGCACCC GCGCCTACAA GATGAAGAGG CCGGTGAAAT TCACCTTTCT CGATTTCTCG ACGCTTGAAG GCAGGCACGA AGCCTGCAAA CGCGAACTCG ACTTCAACCG CCGCACCGCG CCGGAAATCT ATCTCTCGCT TGTCCCCGTG CGCGAAACGG AAGAGGGTTT TCGTCTGGGC GGGGATAAGG GCGAGCCTGT CGAATGGCTG GTCGAGATGA AACGCTTTGG CGGCGAGGGG CTTCTCGCGG CGAAGGCGGA GCGGGGACAA CTTTCGCTCG ACCTGGTGGA AGAGCTGGCG GCGGATGTGG CGGCCTTTCA TGCACGCGCG AAGGTGCATC GCGATTTCGG CGGTGCGGAT AATTTCGCGA AGATCGTCGC GGGAAGCGAA ACCGACATGC AGGCGAGCAT CGGTCCCGTT TTCGATGCCG AGCAGGCGGC GCGTGTCACC CGGCGCAGCA AGGAACTGAT CGAGGAACAT CGGGCGCTTC TCGATGCGCG GCGCGACACC GGCTTCGTGC GCCACAGCCA CGGCGATCTC CACCTCGGCA ATGTGACGGA AATCGACGGG CGGCCCGTCA TTTTCGACTG CATCGAATTC AGCGACCGCA TCGCGCGCAT CGACGTGGCC TATGATCTCG CCTTTCTTCT GATGGATCTC GGCTTTCGCG CGGAGAGCGA CGAGCGGCTG GCCGGCTATG CCAATCGCGC AATGAACGTC TATCTCGACC ATGTGCCGCA GGCGGAAATC GGCGCGGCCA CCGAGGGGCT TGCGCTGCTG CCGCTCTTCA TGGCGACGCG CGCGGTGGTG CGCGCCAAGG TGACGGCGGT GCAGGCAACG GGTGAGGACT CGAAAGAGAA GAGGAAGCTC GCACGCGCCT ATCTCGATTT CGCGGACCGG CTGCTGGAGG CGAGACCGCC GCGCCTCGTC GCGGTGGGCG GACTTTCGGG CACCGGCAAG TCGACGCTGG CAAAGGCACT GGCGGCGCTT ATCGGCGGCG CGGCGGGCGC GGTGCATATC CGCTCCGACA CGGTGCGGAA GCGCCTCTTC GGCGTCGCGC CGCTGGAGCG GCTGCCGGAG GAAGCCTATG CGGAAGGCGC GGGCGAGCGT GTTTATGCGG AGATGATGCG GCTTGCGCGC CTGTCGCTCG GTGCCGGGAT GAGCGTTGTG GTGGACGCCG TATTCGCGAA GCCGCAGGAG AGGGTGGAGG GCGAACGGCT TGCGCGCGAG GCCGGCGTGA CGTTTGACGG GCTCTGGCTC GACGCGCCGG CGGAGGTGCT GGAAGCGCGC GTGGCCGCAC GGGAGAAAGA GGGCGGCGAT CCCTCCGATG CAGGCGTGGC GGTTCTGAAG CGGCAACTGG CCTACGACCT CGGCCGGATG AAATGGCTGA CTGTGGATGC ATCGGGCACG CCGGACGAGG CGCTGGCGGC GGCAGCAGGT TCTATCGACA TCAACCCGCT GTCGTAG
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Protein sequence | MADSAENDAL LAFLAMPETY GLASGETVTR IDTHASHVFL AGTRAYKMKR PVKFTFLDFS TLEGRHEACK RELDFNRRTA PEIYLSLVPV RETEEGFRLG GDKGEPVEWL VEMKRFGGEG LLAAKAERGQ LSLDLVEELA ADVAAFHARA KVHRDFGGAD NFAKIVAGSE TDMQASIGPV FDAEQAARVT RRSKELIEEH RALLDARRDT GFVRHSHGDL HLGNVTEIDG RPVIFDCIEF SDRIARIDVA YDLAFLLMDL GFRAESDERL AGYANRAMNV YLDHVPQAEI GAATEGLALL PLFMATRAVV RAKVTAVQAT GEDSKEKRKL ARAYLDFADR LLEARPPRLV AVGGLSGTGK STLAKALAAL IGGAAGAVHI RSDTVRKRLF GVAPLERLPE EAYAEGAGER VYAEMMRLAR LSLGAGMSVV VDAVFAKPQE RVEGERLARE AGVTFDGLWL DAPAEVLEAR VAAREKEGGD PSDAGVAVLK RQLAYDLGRM KWLTVDASGT PDEALAAAAG SIDINPLS
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