Gene Plav_0792 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPlav_0792 
Symbol 
ID5453761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameParvibaculum lavamentivorans DS-1 
KingdomBacteria 
Replicon accessionNC_009719 
Strand
Start bp856965 
End bp858551 
Gene Length1587 bp 
Protein Length528 aa 
Translation table11 
GC content66% 
IMG OID640876361 
Producthypothetical protein 
Protein accessionYP_001412072 
Protein GI154251248 
COG category[S] Function unknown 
COG ID[COG2187] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value0.346746 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGGATA GCGCGGAAAA CGACGCCCTG CTTGCATTTC TGGCGATGCC GGAAACCTAT 
GGCCTCGCTT CCGGCGAGAC GGTGACGCGG ATCGACACGC ATGCCTCGCA TGTCTTTCTT
GCCGGCACCC GCGCCTACAA GATGAAGAGG CCGGTGAAAT TCACCTTTCT CGATTTCTCG
ACGCTTGAAG GCAGGCACGA AGCCTGCAAA CGCGAACTCG ACTTCAACCG CCGCACCGCG
CCGGAAATCT ATCTCTCGCT TGTCCCCGTG CGCGAAACGG AAGAGGGTTT TCGTCTGGGC
GGGGATAAGG GCGAGCCTGT CGAATGGCTG GTCGAGATGA AACGCTTTGG CGGCGAGGGG
CTTCTCGCGG CGAAGGCGGA GCGGGGACAA CTTTCGCTCG ACCTGGTGGA AGAGCTGGCG
GCGGATGTGG CGGCCTTTCA TGCACGCGCG AAGGTGCATC GCGATTTCGG CGGTGCGGAT
AATTTCGCGA AGATCGTCGC GGGAAGCGAA ACCGACATGC AGGCGAGCAT CGGTCCCGTT
TTCGATGCCG AGCAGGCGGC GCGTGTCACC CGGCGCAGCA AGGAACTGAT CGAGGAACAT
CGGGCGCTTC TCGATGCGCG GCGCGACACC GGCTTCGTGC GCCACAGCCA CGGCGATCTC
CACCTCGGCA ATGTGACGGA AATCGACGGG CGGCCCGTCA TTTTCGACTG CATCGAATTC
AGCGACCGCA TCGCGCGCAT CGACGTGGCC TATGATCTCG CCTTTCTTCT GATGGATCTC
GGCTTTCGCG CGGAGAGCGA CGAGCGGCTG GCCGGCTATG CCAATCGCGC AATGAACGTC
TATCTCGACC ATGTGCCGCA GGCGGAAATC GGCGCGGCCA CCGAGGGGCT TGCGCTGCTG
CCGCTCTTCA TGGCGACGCG CGCGGTGGTG CGCGCCAAGG TGACGGCGGT GCAGGCAACG
GGTGAGGACT CGAAAGAGAA GAGGAAGCTC GCACGCGCCT ATCTCGATTT CGCGGACCGG
CTGCTGGAGG CGAGACCGCC GCGCCTCGTC GCGGTGGGCG GACTTTCGGG CACCGGCAAG
TCGACGCTGG CAAAGGCACT GGCGGCGCTT ATCGGCGGCG CGGCGGGCGC GGTGCATATC
CGCTCCGACA CGGTGCGGAA GCGCCTCTTC GGCGTCGCGC CGCTGGAGCG GCTGCCGGAG
GAAGCCTATG CGGAAGGCGC GGGCGAGCGT GTTTATGCGG AGATGATGCG GCTTGCGCGC
CTGTCGCTCG GTGCCGGGAT GAGCGTTGTG GTGGACGCCG TATTCGCGAA GCCGCAGGAG
AGGGTGGAGG GCGAACGGCT TGCGCGCGAG GCCGGCGTGA CGTTTGACGG GCTCTGGCTC
GACGCGCCGG CGGAGGTGCT GGAAGCGCGC GTGGCCGCAC GGGAGAAAGA GGGCGGCGAT
CCCTCCGATG CAGGCGTGGC GGTTCTGAAG CGGCAACTGG CCTACGACCT CGGCCGGATG
AAATGGCTGA CTGTGGATGC ATCGGGCACG CCGGACGAGG CGCTGGCGGC GGCAGCAGGT
TCTATCGACA TCAACCCGCT GTCGTAG
 
Protein sequence
MADSAENDAL LAFLAMPETY GLASGETVTR IDTHASHVFL AGTRAYKMKR PVKFTFLDFS 
TLEGRHEACK RELDFNRRTA PEIYLSLVPV RETEEGFRLG GDKGEPVEWL VEMKRFGGEG
LLAAKAERGQ LSLDLVEELA ADVAAFHARA KVHRDFGGAD NFAKIVAGSE TDMQASIGPV
FDAEQAARVT RRSKELIEEH RALLDARRDT GFVRHSHGDL HLGNVTEIDG RPVIFDCIEF
SDRIARIDVA YDLAFLLMDL GFRAESDERL AGYANRAMNV YLDHVPQAEI GAATEGLALL
PLFMATRAVV RAKVTAVQAT GEDSKEKRKL ARAYLDFADR LLEARPPRLV AVGGLSGTGK
STLAKALAAL IGGAAGAVHI RSDTVRKRLF GVAPLERLPE EAYAEGAGER VYAEMMRLAR
LSLGAGMSVV VDAVFAKPQE RVEGERLARE AGVTFDGLWL DAPAEVLEAR VAAREKEGGD
PSDAGVAVLK RQLAYDLGRM KWLTVDASGT PDEALAAAAG SIDINPLS