| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Plav_0790 |
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| Symbol | |
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| ID | 5453421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Parvibaculum lavamentivorans DS-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009719 |
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| Strand | + |
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| Start bp | 855332 |
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| End bp | 855958 |
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| Gene Length | 627 bp |
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| Protein Length | 208 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640876359 |
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| Product | pyridoxamine 5'-phosphate oxidase |
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| Protein accession | YP_001412070 |
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| Protein GI | 154251246 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0259] Pyridoxamine-phosphate oxidase |
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| TIGRFAM ID | [TIGR00558] pyridoxamine-phosphate oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 35 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 46 |
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| Fosmid unclonability p-value | 0.150003 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGATG TCACCACGGC CACCGACGAG AGCGGTATTT TCACCTCGGA GGACCCGATT
GCGCTCTTCC ATGAATGGAT GGAGCTTGCC CGCGCGAAGG AACCGGAAGA CGCGAATGCC
ATGGCGCTGG CGACGGCGGA TGCTTCCGGT TTTCCCGATG TGCGGATGGT GCTGCTGAAG
GAGGCGGATG CGCGCGGCTT CGTTTTCTAC ACCAATCTCG AAAGCGCCAA GGGACTGGAA
TTAAAGGAGA ATTCCCGCGC CGCCCTGTGC TTCCACTGGA AGAGCCTGCG CCGCCAGGTG
CGCGTCAGAG GCGACGTTAT CCCGGTGAGC AAAGAGGAGG CGGATGCCTA TTTTGCCACG
CGCGCGAGGG ACAGCCAGAT CGGTGCATGG GCATCGAAGC AATCGCGGCC GCTTGCGGGT
CGTTTTGAGC TCGAGAAGCA AGTCGCTGTT TTTGCTGCGA AATTCGGCGT GAGCAGGGTG
CCGCGGCCGG ATCACTGGTC CGGTTTCCGC GTTGTACCGC GCCATATCGA ATTTTGGCGC
GACAGGCCCT TCCGGCTCCA TGATCGCCTT GTTTTTGAAC GGGAAAAGCC CGCCGAGGCC
TGGCGGACGA AGAAGCTTTT CCCCTGA
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| Protein sequence | MNDVTTATDE SGIFTSEDPI ALFHEWMELA RAKEPEDANA MALATADASG FPDVRMVLLK
EADARGFVFY TNLESAKGLE LKENSRAALC FHWKSLRRQV RVRGDVIPVS KEEADAYFAT
RARDSQIGAW ASKQSRPLAG RFELEKQVAV FAAKFGVSRV PRPDHWSGFR VVPRHIEFWR
DRPFRLHDRL VFEREKPAEA WRTKKLFP
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